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Name : ACP_3110 (ACP_3110) Accession : YP_002756118.1 Strain : Acidobacterium capsulatum ATCC 51196 Genome accession: NC_012483 Putative virulence/resistance : Virulence Product : type 4 fimbrial assembly protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3595581 - 3597209 bp Length : 1629 bp Strand : - Note : identified by similarity to GB:AAT00614.1; match to protein family HMM PF00437; match to protein family HMM PF05157 DNA sequence : ATGGCAGACATTCCGGTCATGGCGATTCCTACCGAGGTGGATGAGGTCACGCACGCGCAGACGCTCGCGCGCCGCTATCG CTGTGAGTTTATCGACCTCAAGAACTTTCGCATTCAGCATGAAGTCATTCGCAGCGTGCCGGTGGAGTTGATGTTCCGCT ACAACTTTGTGCCGCTCGAACAGCAGGAAGACCGCATCGTGATCGCCGTCTCTGACCCCAGCCGGCTGATGGTGCTCGAT GAGATTTCAAGCCTGCTGGGGCAGCGCGTGCTCACGCGCGTGGCCACGCTCTCGCAGATCACCGATCTGCTCAAGAAGAC TGAGCAGTCGCAGCGCGTGCTTGATGAAGCCTCAGAAGGACTGACCTTTGACGTGATCTCATCGGAGGACAATCCAGACG AGAACATCTCAATTGAAAAACTGACCTCAGAAGAGGACATCAGCCCGATCATCCGCCTGGTCGACACGACCATCTTCACC GCGCTCGAGCGCCGTGCCTCTGACATTCACATTGAGACCTATGACGACTCGGTGGTGATCAAGTACCGCATTGACGGCGT GCTGCAGGCGGCCATGGCACCTATTGCGCGCGAGCACCACCAGACCATTCTGTCGCGCATCAAGGTCATGAGCGAGCTCG ACATTGCCGAGCGGCGTGTGCCGCAGGACGGGCGCTTTCGCGTGCGCTACAAGACGCGCCTGATCGACTTCCGCGTCTCC ATTATGCCGACCGTGCATGGCGAAAACGCCGTGCTGCGCGTGCTCGACAAAGAGTCGATGAGCGAGAAGTTCCGCCAGCT CACGCTCGACGTAGTGGGCTTTCATGAGGACGATCTGCGGCGCTTCCGGCGCTACATTCGCGAGCCCTACGGCATGGTGC TCGTGACGGGCCCCACCGGCTCGGGCAAAACCACTACCCTCTATGCCGCTCTCAACGAGATCAAGAGCGACGAAGACAAG ATCATCACCATTGAAGACCCGGTCGAGTACCAGATTCGCGGCATCACGCAGATTCCGGTCAACGAGAAAAAGGGCCTCAC CTTTGCGCGCGGACTTCGCTCCATTCTGCGCCATGACCCGGACAAGATTCTCGTCGGTGAAATTCGCGACCAGGAGACGG CGCAGATCGCCATCAACTCCGCGCTGACCGGCCACCTGGTGTTCACCACCGTGCACGCCAACAACGTGGTAGACGTGCTG GGCCGCTTTCTGAACATGGGCGTGGAAGCCTACAACTTTGTCTCGGCGCTCAACTGCATTCTTGCGCAGCGGCTGGTGCG CACCATCTGCGACTTCTGCGCGCATGAGGTGTATTACGACGACGAGACGCTGATCACCGGCGGCCTCAACCCCGACGAGT GGCGCGGCTTTGCCTTCCGCGAAGGCGCCGGGTGCATCGAGTGCGGCGGTACTGGATATCGCGGCAGAACCGCGATTCAC GAGCTGCTCGATCTCACTGACCCGATCCGCGAAATCATTCTTGAAAAGAAGCCCAGCTCTGAAGTGCGGCGTCTGGCGCA GCAGGAAGGCATGCAGTTCCTGCGCGAGAGCGCGATTGACCGCGTGCGCAGGGGTTTCACCACGTTAAAGGAAATCAACA AAGTTACGTTTATCGAGGCGGCTCGCTAG Protein sequence : MADIPVMAIPTEVDEVTHAQTLARRYRCEFIDLKNFRIQHEVIRSVPVELMFRYNFVPLEQQEDRIVIAVSDPSRLMVLD EISSLLGQRVLTRVATLSQITDLLKKTEQSQRVLDEASEGLTFDVISSEDNPDENISIEKLTSEEDISPIIRLVDTTIFT ALERRASDIHIETYDDSVVIKYRIDGVLQAAMAPIAREHHQTILSRIKVMSELDIAERRVPQDGRFRVRYKTRLIDFRVS IMPTVHGENAVLRVLDKESMSEKFRQLTLDVVGFHEDDLRRFRRYIREPYGMVLVTGPTGSGKTTTLYAALNEIKSDEDK IITIEDPVEYQIRGITQIPVNEKKGLTFARGLRSILRHDPDKILVGEIRDQETAQIAINSALTGHLVFTTVHANNVVDVL GRFLNMGVEAYNFVSALNCILAQRLVRTICDFCAHEVYYDDETLITGGLNPDEWRGFAFREGAGCIECGGTGYRGRTAIH ELLDLTDPIREIILEKKPSSEVRRLAQQEGMQFLRESAIDRVRRGFTTLKEINKVTFIEAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-78 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-78 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ACP_3110 | YP_002756118.1 | type 4 fimbrial assembly protein | VFG1876 | Protein | 2e-79 | 46 |
| ACP_3110 | YP_002756118.1 | type 4 fimbrial assembly protein | VFG0182 | Protein | 4e-78 | 44 |
| ACP_3110 | YP_002756118.1 | type 4 fimbrial assembly protein | VFG2048 | Protein | 1e-78 | 42 |
| ACP_3110 | YP_002756118.1 | type 4 fimbrial assembly protein | VFG2426 | Protein | 5e-74 | 41 |
