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Name : serS (ACP_3008) Accession : YP_002756017.1 Strain : Acidobacterium capsulatum ATCC 51196 Genome accession: NC_012483 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3488558 - 3489892 bp Length : 1335 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATTTAGCATTTGTCCGCGCCAATCTTGAACTGGTGGAAGCCAGACTGCGCGCGCGCGGCCAGAACCCCGCCGA ACTGCTGGGCGACTTTGCCGCCGTTGACCAGCACCGCCGTGAACGCATCACCGAGGCCGAACAGCTCAAGGCCACCCGCA ACAAGCTGAGCGAAGAAGTGGCCCGCCTGCGCAAGGCGAAGGAAGATGCTTCGGCCGTGATGGAAGAGACGCGGCAGCTC AAGACAAAGATTGAAGATCTGGAACGCGCGGCTACCGAGGCCGAGGAGCAGCTTCGCGAGCGGATGGCGCGCATCCCGAA CCTGCCGTATGAAGACGTGCCCACGGGCGCGAGCGCCGAAGACAATGTAGAGGTGAAGCGCTGGGGCACTCCGCGGGAGT TTGACTTTGCGCCGAAGCCGCACTGGGAGCTGGGCGAGCAGCTTGGCATTCTGGACTTTGAGCGCGCGGCCAAGCTCTCA GGCGCGCGATTTGCCGTTTACTGGGCTGAGGGTGCGAGGCTGGAGCGCGCGCTGGCGGCCTTTATGCTCGACCTGCACAC GCGCGAGCACGGTTACACCGAAGTGCTGCCGCCGTTGATGGTGAACAGCCGCTCGCTCTTTGGCACGGGGCAGTTGCCCA AGTTTGCCGAAGACCTCTTTCGCTGCGAGGACGGCGAGCCGTACCAGGCGGGCAAGTACCGGGAGAATGACCACTGGCTG ATTCCTACCGCGGAAGTGCCGCTGACGAATCTGTTTCGCGATGAGACGCTGGACGATAGCCAACTGAGCACCTCTCTGGT GGCGCATACCTCATGCTTCCGTTCCGAGGCCGGGTCTTATGGCAAGGATGTTCGGGGTATTATCCGGCAGCATCAATTTC AGAAGGTGGAATTGGTGAAGTTCACGCGGCCCGAGGACAGTGCCGCCGAGCACGAGGCGCTGACACGCCATGCCGAGACG GTGCTGGAGCGGCTGGGGCTGCCGTACCGCCGCATGCTGCTGTGCACGGGAGATATGGGCTTCAGCTCGGCCAAGACCTA TGACCTTGAGGTGTGGCTGCCGGGGCAGCAGGTGTACCGGGAGATTTCTTCCTGCTCGAACTTTGACGCGTTTCAGGCGC GGCGGGCGGGCATTCGCTACCGGCCGCGCGGGCAGGGCAAGTCGGCCCATGTGCATACGCTGAATGGCAGCGGTCTTGCG ATTGGGCGCACGTGGCTGGCGATTCTGGAGAACTATCAGCAGGCCGACGGCTCGGTTCGTATTCCCGAAGCGTTGATTCC TTACATGGGGACGGAAGTGATCGAGTCCCGCAACGTAGCGCAAGGAGCGAAGTAA Protein sequence : MLDLAFVRANLELVEARLRARGQNPAELLGDFAAVDQHRRERITEAEQLKATRNKLSEEVARLRKAKEDASAVMEETRQL KTKIEDLERAATEAEEQLRERMARIPNLPYEDVPTGASAEDNVEVKRWGTPREFDFAPKPHWELGEQLGILDFERAAKLS GARFAVYWAEGARLERALAAFMLDLHTREHGYTEVLPPLMVNSRSLFGTGQLPKFAEDLFRCEDGEPYQAGKYRENDHWL IPTAEVPLTNLFRDETLDDSQLSTSLVAHTSCFRSEAGSYGKDVRGIIRQHQFQKVELVKFTRPEDSAAEHEALTRHAET VLERLGLPYRRMLLCTGDMGFSSAKTYDLEVWLPGQQVYREISSCSNFDAFQARRAGIRYRPRGQGKSAHVHTLNGSGLA IGRTWLAILENYQQADGSVRIPEALIPYMGTEVIESRNVAQGAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-104 | 55 |
