|
Name : kdsB (ACP_2812) Accession : YP_002755830.1 Strain : Acidobacterium capsulatum ATCC 51196 Genome accession: NC_012483 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 3280191 - 3280928 bp Length : 738 bp Strand : + Note : identified by similarity to SP:P42216; match to protein family HMM PF02348; match to protein family HMM TIGR00466 DNA sequence : GTGTCTTCCCTGAATGTTCTCGGTGTCATTCCGGCCCGCATCGGGTCCACCCGCCTGCCGCGCAAGGTGCTGCGCGAGAT TGCCGGCGAGCCCATGCTCGCCTGGGTCTATCGTGCCGCGCGCGCCAGCGGCCAGTTGCGGCAGGTGCTCATCGCTACCG ATGCCGAAGAAGTCATGGAGTTTGCACGGCAAAAAGGCCTGCCGGCCATCTTCACGCCCGAGGACTGCGCTAGCGGAACC GATCGCGTCTTTGTGGTGGCGCAGTCGATCGATGCCGATATTTACGTGAACATTCAGGGCGATGAACCCATGCTGACCCC GGCGCACTTCACGGCGCTGCTAGCTCCCTTTGAGCAGCCTCACGTGCAGGTGACCACGCTGTCGGTGCCTTGCTCCGAAG ATGAGATCGCAAACCCCAACGCCGTCAAGGTGGTCACTGCCGCCGATGGCCGCGCCTTGTACTTTTCCCGCGCCACCATC CCCTATGATCGCGATGCCGCTGGCTTCATCGGCTACCGCAAGCATCTGGGGCTGTATGCCTATCGCAAGGCAGCGTTGCG GCGCTTTGCCACTCTGCCGCCCTCGCGCCTGGAAGAGATTGAGCGGCTCGAACAGTTGCGCCTGCTTGAAAACGGCATCG ACATTCATGTGGCCGAGGCCCCGGGCAGCACCATCGGCGTTGATACCGAGGAGGATCTGCGGGCCGTCGAGCAACTGCTG CTGGAGCGCAAAAAGTAG Protein sequence : MSSLNVLGVIPARIGSTRLPRKVLREIAGEPMLAWVYRAARASGQLRQVLIATDAEEVMEFARQKGLPAIFTPEDCASGT DRVFVVAQSIDADIYVNIQGDEPMLTPAHFTALLAPFEQPHVQVTTLSVPCSEDEIANPNAVKVVTAADGRALYFSRATI PYDRDAAGFIGYRKHLGLYAYRKAALRRFATLPPSRLEEIERLEQLRLLENGIDIHVAEAPGSTIGVDTEEDLRAVEQLL LERKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-32 | 44 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-32 | 44 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 8e-33 | 44 |
