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Name : clpC (ACP_2765) Accession : YP_002755785.1 Strain : Acidobacterium capsulatum ATCC 51196 Genome accession: NC_012483 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3220240 - 3222696 bp Length : 2457 bp Strand : - Note : identified by similarity to SP:P37571; similarity to GB:AAC44446.1; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGTTCGAACGCTATACAGAAAAAGCACGGCGCGTGATCTTTTTCGCACGGTATGAGGCCAGCCAGTTCGGCTCGCCCTA TATCGAGACCGAGCACCTGCTGCTGGGTCTGCTGCGCGAGGACAAAGCGTTGACCAATCGCTTCCTTCGCTCCCACGCGT CAGTGGAGTCGATTCGCAAGCAGATTGAAGGCCACACCACCATTCGCGAAAAGGTCTCGACCTCCGTCGACCTGCCGCTC TCCAACGAATGCAAGCGCGTGCTCGCCTACGCCGCCGAAGAAGCCGAGCGGCTCTCGCACAAGCACATCGGCACCGAGCA CCTGCTGCTCGGCCTGCTGCGTGAAGAAAAGTGCTTCGCCGCTGAAATCCTCCAGGAGCGCGGCCTCAAGCTCGTCGCCA TTCGCGAAGAGCTGGCGCGCGCCACGCAGGAGAAAGCGCCGCCCGCGCAGCGCAACCGGGAATCCAGCCTGCTGGCCGAG TTTTCGCGCGACCTCACCCAGGCCGCGGCTGACAACACACTCGACCCGCTCATCGGCCGCGATCAGGAGCTCGAACGCGT CGTCCAGATTCTCTGCCGCCGCACCAAAAACAATCCGGTGCTCATCGGCGAGCCAGGCGTCGGCAAAACCGCCATCGTTG AGGGGCTGGCCCAGCGCATCGCCGACGGCGACGTGCCCAGCTTCCTCGCCGACAAGCGCGTGCTCGCGCTCGACCTCTCA TTGATCGTCGCGGGAACGAAATACCGCGGCCAGTTTGAAGAGCGCCTCAAGACCATCATGAAAGAGCTGATGGAAAATCA GAACTCCATCATCTTCATCGATGAGCTGCACACGCTGGTCGGCGCAGGCTCGGCCGAGGGCTCGCTCGACGCGGCCAACA TCCTCAAGCCCGCCCTCTCGCGCGGTGAAATCCAGTGCATCGGCGCCACCACGCCCGGCGAGTACCGCAAGTCCATCGAG AAAGACCGCTCCCTCGAGCGGCGCTTCCAGGCCGTCAAGGTGCCGCCGCCCAATGAAGAGGATGCCATCAAGATCATCAT GGGCATCAAAGACCGCTATGAGAAGTTCCACGCGGTCAGCTACACCGATGATTCCATCGAGTTCGCCGTCTCGCACTCCA ATCGCTACATTCCCGACCGCTTCCTGCCCGACAAGGCCATCGACCTCATCGACGAGGCCGGCGCGCGCGTCAAGCTGCGC CAGACCTCGCTGCCTGAGGAGATCACCGAGGTACAGAAGCGCATCAAGTTCATCGTCCACCGCATGGAGAACGCCATCGC GAACCACGAGTTCGAAAAGGCGCGCTTCTACTCCGACGAGGAACGCAAGGAGCGCGAAAACCTGCGCGCCCTCCGCGAGA AATATCACCTCGATGACTCCACCGCCGGCATCGTAAGCCGCGAAGACATCGAAGACGTGGTCAGCCGCTGGACCGGCGTG CCCATCACTTCGATCAAGGAAGAAGAGACCCAGAAGCTGCTGCGCGTCGAAGGCGAGCTGCACAAGCGCGTCATCTCGCA GGAGAAGGCCATCTCGGCCCTCGCCCGCGCCATCCGCCGCTCCCGTGCGGGCCTCAAGTCGCCGCACCGGCCCATCGGCT CGTTCCTCTTCCTCGGCCCCACCGGCGTTGGCAAAACCGAGGTCGCGCGCACCCTCGCGCAATTCCTTTTCGGCAGCGAG AAGTCGATCATCCGCTTCGATATGTCGGAGTTCATGGAAAAGCACTCCGTCTCGAAGCTCATCGGTTCGCCTCCGGGCTA CGTCGGCTATGAGGAAGGCGGCCAGCTCACCGAGCGCGTCAAACGTTCGCCCTACTCGGTCGTGCTGCTCGACGAAATCG AAAAGGCGCACCCGGATGTCTTCAACATCCTGTTGCAGGTCTTTGAGGATGGCCAGTTGACCGACGGCCTCGGCAACACG GTCGACTTCAAGAACACCATCATCATCATGACCTCCAACATCGGCGCGCGGCACCTGCAGCGCAAGCAGGGCCTCGGCTT CCAGAGCGACCGCGAAGAGCTCGTCATGGACAAGGTCGAAGATCTCGTGCGCAACGAGGTCAAGCGCACCTTCAATCCCG AGTTCCTCAACCGCATCGACGAGATCATCATCTTCCAGTCGCTCACCGACGCCGACCTCATCCAGATTCTTGAACTGCTC GTGCAGCAGCTCAATGCCAATCTGGCGCAGAAGGCCATCACCATCTCGGTCAACGAAGAGGCCAAGAAGTGGATCCTCGA GAAGACGCTCATCGACCGCAGCTACGGAGCGCGCCCCCTGCGCCGCGCACTGCAGCGCTACGTCGAAGACCCGCTCTCCG AGGCCCTCATCGCCGGCCACATCAGTGACCGTCCGGCCTTCCTTGAGGTCTACCTCGACAACAACCAGCTCTTCTACCGC CCCGTCGCGCGCGAGGGCGAAGACACCAAACCCGAAGGCGTCCTGCTCTACAGCTAA Protein sequence : MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALTNRFLRSHASVESIRKQIEGHTTIREKVSTSVDLPL SNECKRVLAYAAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILQERGLKLVAIREELARATQEKAPPAQRNRESSLLAE FSRDLTQAAADNTLDPLIGRDQELERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIADGDVPSFLADKRVLALDLS LIVAGTKYRGQFEERLKTIMKELMENQNSIIFIDELHTLVGAGSAEGSLDAANILKPALSRGEIQCIGATTPGEYRKSIE KDRSLERRFQAVKVPPPNEEDAIKIIMGIKDRYEKFHAVSYTDDSIEFAVSHSNRYIPDRFLPDKAIDLIDEAGARVKLR QTSLPEEITEVQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENLRALREKYHLDDSTAGIVSREDIEDVVSRWTGV PITSIKEEETQKLLRVEGELHKRVISQEKAISALARAIRRSRAGLKSPHRPIGSFLFLGPTGVGKTEVARTLAQFLFGSE KSIIRFDMSEFMEKHSVSKLIGSPPGYVGYEEGGQLTERVKRSPYSVVLLDEIEKAHPDVFNILLQVFEDGQLTDGLGNT VDFKNTIIIMTSNIGARHLQRKQGLGFQSDREELVMDKVEDLVRNEVKRTFNPEFLNRIDEIIIFQSLTDADLIQILELL VQQLNANLAQKAITISVNEEAKKWILEKTLIDRSYGARPLRRALQRYVEDPLSEALIAGHISDRPAFLEVYLDNNQLFYR PVAREGEDTKPEGVLLYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-173 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_002755785.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 1e-136 | 52 |
| clpC | YP_002755785.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 50 |
