Gene Information

Name : ACP_2560 (ACP_2560)
Accession : YP_002755586.1
Strain : Acidobacterium capsulatum ATCC 51196
Genome accession: NC_012483
Putative virulence/resistance : Resistance
Product : lipoprotein ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2965437 - 2966147 bp
Length : 711 bp
Strand : +
Note : identified by match to protein family HMM PF00005; match to protein family HMM PF02463

DNA sequence :
GTGTCCACCATCGTTGCTGAAAAGCTCACCAAGACATACAAATCCGGCAGAATTCAGGTCACCGCGCTGCGCGGCGTCTC
CTTCGGCATTGAAGGAGGCGAGTTTGTCAGCATCGTCGGACCCTCCGGCAGCGGCAAGTCCACGCTCTTCTATCTGTTAG
GCGGACTTTCCCGTGCCACCAGCGGCAGCGTGCACATTGATGGTGTCGATTTTGTCGCCCTCAGCGACGCCGAACGCACC
CGCATCCGCAAGCAGAAAATCGGCTTCGTCTTTCAAAAGTTCAACCTGCTGCCCACGCTCACCGCACGGCAGAACATTGA
ACTGGCACACGAAATCTCGGGCCGCAAAGAACCGCTCGACAATAAATTCCTCGACCACCTGGCCGATCTGCTCAGCATCC
GCGGCCGTCTCGATCACCGGCCCTCTGAGCTCTCCGGCGGCGAGCAGCAGCGCGTCGCCATCGCTCGCGCGCTCGTCAAT
CGCCCCGCCATCGTGCTGGCCGACGAGCCCACCGGCAATCTCGACACAGAGAACTCTGACGCTGTGCTCCAGATGCTCCG
CCGCTCCAACAAGGAACTGAAGCAGACCGTCCTCATGATCACCCACAACCCCGAGGCCGCCTGCATCGGCGACCGCATCA
TTCACATGCGCGACGGGGAAATCCGCGGCATCGAGCCGGGCCAGGGCCGCATCACCGGCCATAGCTGGTAG

Protein sequence :
MSTIVAEKLTKTYKSGRIQVTALRGVSFGIEGGEFVSIVGPSGSGKSTLFYLLGGLSRATSGSVHIDGVDFVALSDAERT
RIRKQKIGFVFQKFNLLPTLTARQNIELAHEISGRKEPLDNKFLDHLADLLSIRGRLDHRPSELSGGEQQRVAIARALVN
RPAIVLADEPTGNLDTENSDAVLQMLRRSNKELKQTVLMITHNPEAACIGDRIIHMRDGEIRGIEPGQGRITGHSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-31 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACP_2560 YP_002755586.1 lipoprotein ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-45 49
ACP_2560 YP_002755586.1 lipoprotein ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-46 48
ACP_2560 YP_002755586.1 lipoprotein ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-40 45
ACP_2560 YP_002755586.1 lipoprotein ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-39 44
ACP_2560 YP_002755586.1 lipoprotein ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-32 43