Gene Information

Name : ACP_2533 (ACP_2533)
Accession : YP_002755562.1
Strain : Acidobacterium capsulatum ATCC 51196
Genome accession: NC_012483
Putative virulence/resistance : Resistance
Product : efflux ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2942677 - 2943351 bp
Length : 675 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGAGAACTGCCATTCAGGCCGAAGGCGTAGAGAAATGGTTTGGCGCGGGACCGGCTCGGACCTACGCTCTGCGTCGCGT
GAATTTACAAGCATTTTTCGGAGAGATCGTATATATCGTGGGTCCTTCGGGAAGCGGAAAGACGACACTGCTGAGTGTGA
TCTCAGGCATTCTGCGGCCAGACGGCGGCACAGTACAAAACGACGGTGTCAATCTCTGGAAGTTGCCGGCTGATGAATTA
GCCGAATTCCGCCTGAACCGCATCGGCTTTGTATTTCAGGACTACCATTTATTTCCCCGGCTCACCACTGCCGAAAACGT
TGCCATTCCGCTCATTCTCAAACGCAAGCCCTGGAAAGAAGCACTGCAGGAAGCGCAACGCTATCTCGAAATTGTCGGCC
TCGGCAATCGTGCCGATCTGCCACCGGTGAAGCTGAGTGGCGGCGAGCAGCAGCGCGTGGCGATTGCACGCGCCATTGCA
AGCGCCCCGGACATTCTGATTATGGATGAGCCTACAGCATCCCTCGATGGAGATACCGGCCGCACGATTGTTGGGTTTGT
GAAGTCCACCTTTTTGAATGACCAACGCTGCATTGTGGTGGTGACACACGACAGCCGCATCTACGAATTTGCCTCACGCA
TTCTGCACATGGAAGACGGACAACTCACCCAGTAG

Protein sequence :
MRTAIQAEGVEKWFGAGPARTYALRRVNLQAFFGEIVYIVGPSGSGKTTLLSVISGILRPDGGTVQNDGVNLWKLPADEL
AEFRLNRIGFVFQDYHLFPRLTTAENVAIPLILKRKPWKEALQEAQRYLEIVGLGNRADLPPVKLSGGEQQRVAIARAIA
SAPDILIMDEPTASLDGDTGRTIVGFVKSTFLNDQRCIVVVTHDSRIYEFASRILHMEDGQLTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACP_2533 YP_002755562.1 efflux ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-32 46