Gene Information

Name : ACP_2502 (ACP_2502)
Accession : YP_002755533.1
Strain : Acidobacterium capsulatum ATCC 51196
Genome accession: NC_012483
Putative virulence/resistance : Resistance
Product : efflux ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2892007 - 2892729 bp
Length : 723 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGAAAACACGCAACCATTGATCGAGATCGAAGGGCTGACCAAGGTCTTCTATACCGACGAAATTGAAACGCATGCCCT
GTCGGGCATTCACCTGAGAATTGATCGCGGCGAATATGTCGCGATGTCTGGTCCTTCAGGCTGCGGCAAGTCCACGCTGC
TCTCCATCATCGGGCTGCTCGACACGCCGACGGGCGGCAAGTACATGCTGAATGGGCACGAGGTGGAGAATCTTGATTTC
TCGCAGCGCTCGCGCATTCGCAACCAGGAGATCGGTTTCATCTTTCAGAGCTTCAACCTGATTGGCGATCTCACTGTGTA
TGAGAATGTCGAGCTGCCGCTGACTTACCGCTCAGGCATGACGGCGGCGGAACGCAAGCGGCGCGTGCAGGAGTCGCTGG
AGCGAGTGGCGATGGCGCATCGCATGCGGCATTATCCTTCGCAGCTCTCGGGCGGCCAGCAGCAGCGCGTGGCCGTGGCG
CGTGCGCTGGCGGGGTCGCCCTCCATTCTGCTGGCCGATGAGCCGACCGGAAACCTTGACTCGAAGAACGGCGAGGCCGT
GATGGATCTGCTGCGCAATCTGCACCGCGAGGGCGCGACCATCTGCATGGTGACGCACGATCCGCGCTTTGCCGCGCATG
CCGAGCGTCAGGTGCATTTGTTTGACGGCAAGGTAGTGAGCGAAGAGGAATTGCAGCGCCAGTTGGCGGCGATTCAGGCC
TGA

Protein sequence :
MENTQPLIEIEGLTKVFYTDEIETHALSGIHLRIDRGEYVAMSGPSGCGKSTLLSIIGLLDTPTGGKYMLNGHEVENLDF
SQRSRIRNQEIGFIFQSFNLIGDLTVYENVELPLTYRSGMTAAERKRRVQESLERVAMAHRMRHYPSQLSGGQQQRVAVA
RALAGSPSILLADEPTGNLDSKNGEAVMDLLRNLHREGATICMVTHDPRFAAHAERQVHLFDGKVVSEEELQRQLAAIQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACP_2502 YP_002755533.1 efflux ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-47 49
ACP_2502 YP_002755533.1 efflux ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-36 47
ACP_2502 YP_002755533.1 efflux ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-30 44
ACP_2502 YP_002755533.1 efflux ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-30 41
ACP_2502 YP_002755533.1 efflux ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-23 41