Gene Information

Name : ACP_1956 (ACP_1956)
Accession : YP_002755021.1
Strain : Acidobacterium capsulatum ATCC 51196
Genome accession: NC_012483
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2298520 - 2298711 bp
Length : 192 bp
Strand : -
Note : identified by match to protein family HMM PF01381

DNA sequence :
TTGAAGAACCGCTTGCGTGATCTGCGCGCGGAGCGTGGCTGGAGCCAGGCCGATCTGGCCCAGGAACTTGGGGTTTCACG
GCAATCGGTGAATGCGATTGAGACGGGACGGTTTGATCCGAGCCTGCCGTTGGCGTTCAAGCTGGCGCGATTGTTTGGCG
AGCCGATTGAGAAGATTTTTGTTGAGGAGTAG

Protein sequence :
MKNRLRDLRAERGWSQADLAQELGVSRQSVNAIETGRFDPSLPLAFKLARLFGEPIEKIFVEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-12 52
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-06 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-06 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACP_1956 YP_002755021.1 DNA-binding protein VFG2168 Protein 4e-07 45
ACP_1956 YP_002755021.1 DNA-binding protein VFG2175 Protein 4e-07 45