Gene Information

Name : ACP_1548 (ACP_1548)
Accession : YP_002754628.1
Strain : Acidobacterium capsulatum ATCC 51196
Genome accession: NC_012483
Putative virulence/resistance : Unknown
Product : IS3 family transposase orfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1844714 - 1844980 bp
Length : 267 bp
Strand : -
Note : identified by match to protein family HMM PF01527

DNA sequence :
ATGCCGAAGAGAAAGTCTTCCGTGGCGCAGATCGTGTCTGTATTGAAGCAGGCCGAGGTGGATGTCCTGATCGCGGAGTT
GATTCGGAAGGTGGGGATAACGGAGCAGACCTACTACCGTTGGGATGCGAAGTATGCAGGGCTTGAGGTGGATCAGGTGC
GCCAGGTCAAGCAACTCCGGGACGAGAACACGCGGTTGAAGCAGTTGCTTGCGGAACTGACCCTGGACAAGACGATGTTG
CAGGATGTGCAGCGAAGAAAGTTGTAA

Protein sequence :
MPKRKSSVAQIVSVLKQAEVDVLIAELIRKVGITEQTYYRWDAKYAGLEVDQVRQVKQLRDENTRLKQLLAELTLDKTML
QDVQRRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-16 45
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-16 45
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 9e-13 43
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-13 43
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 3e-13 43
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 3e-13 43
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-15 41