|
Name : ACP_1229 (ACP_1229) Accession : YP_002754326.1 Strain : Acidobacterium capsulatum ATCC 51196 Genome accession: NC_012483 Putative virulence/resistance : Unknown Product : pyridine nucleotide-disulfide oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1445914 - 1447266 bp Length : 1353 bp Strand : + Note : identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 DNA sequence : ATGAATAAGCAATTCGATCTCATTGCAATTGGAACTGGATCAGCGGCGTCGTCTGTGGCTTCGCGTTGTCGTGCCGCCGA CTGGCAGGTTGCCGTAATTGATTCACGGCCGTTTGGGGGCACCTGTGCGCTGCGTGGCTGCGATCCGAAAAAGGTGCTGG TTGGGGCAGCGGAGCTGATCGACTGGGGCCGTCGCATGCAAGGCAAGGGAATCCAGGCCGGAGAACTGAAAATCAACTGG CGAGAGCTGATGCATTTCAAGCGAACCTTCACCGAGCCGGTCCCTAAACATCGGGAAGAAGGTTTCCGCAAGGCCGGCAT CGAGGCGTTCCACGGTCGCGCCCGTTTCACTGGCCCTACATCCATTCAAGTTGGCGAAGATACGCTGGAGGCGCGCCACA TCGTCATCGCTGCCGGGCAGAAGCCTGCCGATCTGAAGATACCCGGCTCTGAGCACCTCATCGACAGTGAACACTTTCTC GAACTCGATAGCCTTCCGTCACGAATTCTCTTCATCGGAGGGGGATACATCGCGTTTGAGTTTGCGCATGTTGCGCTGCG GGCTGGAGCGCAGGTCACCATAGTCCATCGAGACAGCCGTCCACTGCGTCAGTTCGATTCCAGCATGGTGGAACTTCTGG TTCAGCATACGCGCGCGTCAGGAGCGGACATCCAGCTTGAGACCGAGGCCGTCGCGGTTGAAAAGCAATCGGGAGGCTTG GCTGTGCGGGTCTCGACCTCAGGCCAGATGCGGACCTTGTACGCGGACATGGTCGTCCACGCCGCTGGGCGTGAGCCCGA GATCGACGACATGAATCTCGACGCGGGCGACGTTGCGTGGGACCGGCACGGCGTGAAGGTGAATGAATATCTGCAGAGTG TTTCCAATCCGGCGGTGTACGCCGCAGGCGATGCCGCCGCCAGCGGAGGGCCCCCGCTCACGCCCGTAGCTTCTTACGAC GGCGTGTTGGTAGCAACAAATCTGCTCAAAGGAAATCATGCCAAGCCCGACTACAACGGAATCCCTTCCGCCGTGTTTAC GATTCCACCGCTTGCGTCCGTCGGATTGACGGAAAGCGCAGCGCGGGAAAAGGGATTGAAGTTCACAGTGAAGACGGAAT CAACCGGGAGCTGGTATTCCTCGCGAAGGGTTGGCGAATCGTCTTCTGGCTACAAGACGCTGGTGGAAGAGAGAACGGAT CGCATCCTCGGCGCGCATCTTTTCGGCGGCGCCGCCGCAGAAGTCATCAATGTGTTTGCGCTCGCCATCCGGTCGGGAAT TCCAGCCCGGGATCTGAAACATATGATCTTCAGTTATCCGACCCATGGGTCGGATGTGTCTTACATGCTCTAA Protein sequence : MNKQFDLIAIGTGSAASSVASRCRAADWQVAVIDSRPFGGTCALRGCDPKKVLVGAAELIDWGRRMQGKGIQAGELKINW RELMHFKRTFTEPVPKHREEGFRKAGIEAFHGRARFTGPTSIQVGEDTLEARHIVIAAGQKPADLKIPGSEHLIDSEHFL ELDSLPSRILFIGGGYIAFEFAHVALRAGAQVTIVHRDSRPLRQFDSSMVELLVQHTRASGADIQLETEAVAVEKQSGGL AVRVSTSGQMRTLYADMVVHAAGREPEIDDMNLDAGDVAWDRHGVKVNEYLQSVSNPAVYAAGDAAASGGPPLTPVASYD GVLVATNLLKGNHAKPDYNGIPSAVFTIPPLASVGLTESAAREKGLKFTVKTESTGSWYSSRRVGESSSGYKTLVEERTD RILGAHLFGGAAAEVINVFALAIRSGIPARDLKHMIFSYPTHGSDVSYML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 4e-115 | 52 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 7e-115 | 52 |
