Gene Information

Name : rdgB (ACP_0104)
Accession : YP_002753254.1
Strain : Acidobacterium capsulatum ATCC 51196
Genome accession: NC_012483
Putative virulence/resistance : Unknown
Product : rdgB protein
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 145930 - 146541 bp
Length : 612 bp
Strand : -
Note : identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042

DNA sequence :
ATGGCTCTGACTCTTTATGTTGCCTCCTCGAATGCCGGTAAGCTGCGCGATTTTCGCGTGGCGGCCGGCCATACCGCGAC
GGAAATTTTGCCCCTGCCGGGACTGGCGGAGATCGATGCCCCTGAGGAAACGGGGACGACCTTTGCCGAGAATGCGCGCC
TGAAAGCGGAGTTCTACAGCCGGTGCCGGCCGGGAGGACTGGTGCTGGCCGACGACTCGGGCCTTGAGGTGCGGGCGCTT
GGGCTCCTGCCCGGGGTGCGGTCGGCGCGCTTTGCCGAGGATGCCGAGTACCTGCCCGGTTCCCCGCTGTCAGCCGATGA
GCGCAACAACCTGCTGCTGATGGATCGGATGCGGGGAGTGGAGGATCGCGCGGGGCGGTATGTTTGCGTGCTCTCGGTGG
CGCGGGATGGCGTGGAGATTGCCTCGGCGGAGGGTGAGGTGGCAGGCGAGATTCTTGGGGTCCCGCAGGGGACGGGCGGA
TTTGGGTATGATCCGCTGTTTTATCTGCCGGAGCTTGAAAAGACGATGGCCGAGATCGATCTGGAGACAAAGCTGCGGCT
GAGCCATCGGGGCGCGGCGCTGCGGGTATTGCTGGCCCGGCTGCCGGGGTGA

Protein sequence :
MALTLYVASSNAGKLRDFRVAAGHTATEILPLPGLAEIDAPEETGTTFAENARLKAEFYSRCRPGGLVLADDSGLEVRAL
GLLPGVRSARFAEDAEYLPGSPLSADERNNLLLMDRMRGVEDRAGRYVCVLSVARDGVEIASAEGEVAGEILGVPQGTGG
FGYDPLFYLPELEKTMAEIDLETKLRLSHRGAALRVLLARLPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 5e-15 41