Gene Information

Name : ACP_1006 (ACP_1006)
Accession : YP_002754112.1
Strain : Acidobacterium capsulatum ATCC 51196
Genome accession: NC_012483
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism PLP-dependent enzyme
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1164304 - 1165446 bp
Length : 1143 bp
Strand : -
Note : identified by match to protein family HMM PF01053; match to protein family HMM PF01212

DNA sequence :
ATGGGATTTGCGACGCGGGCGATTCATGCCGGGCAGGAGCCGGACCCGCTGACCGGCGCGGTGAATGTGCCGATTTATCT
CACCTCGACCTATGCGCAGGAAGAGATTGGCAAGCATAAGGGTTACGAATACTCGCGCGTCTCTAACCCCACACGCGATG
CGCTTGAAGTGAATATGGCCGCGCTCGAGGGCGGCACCAGCGCGCATGTGTTCGCGAGCGGCATGGCCGCCATCACGGCG
CTGATCACCATGCTGCGCACGGGCGACCATGTGATCTGCGGCGAGAACGTATATGGCGGCACGCCGCGCATGTTCAACCA
GATTGCAACGCGTTACGGCATCGAGTTCAGCTATGTGGACACGTCGGACCCGGAAAATGTGCGGCGGGCGATTCGTCCCA
CGACGCGGCTGGTGCACATTGAGACGCCGACCAATCCGCTGATGACGATTACGGATATTCGCGCCGTGGCGGACGTCTGC
CACGAGCAGGGCGTGGAGTTGAGCGTGGACAACACGTTTCTAACGCCGTACTTTCAGCGGCCCATTGAGTTTGGCGCGGA
CATTGTGATGCACTCGACCACCAAGTTTCTGAACGGCCACAGCGACGGGCTGGGCGGCGTGCTGGTGGGCACCAAGCCGG
AGCACAAAGAGACCTTTGCGTTTGTGCAGAAATGCACGGGCGGCATTTTGTCACCGTTCGAGTGCTATTTGATTCTGCGC
GGCGTCAAGACGCTGGCCGTGCGCATGAAGCAGCACGATGAGAGCGGACGCAAGGTGGCGGAATATCTGGCGGCGCATCC
CAAGGTGTCGCGCGTGTACTATCCGGGCCTCGCCTCTCATCCGCAGCATGCACTGGCGCAGCAGCAGGCCAGTGGTTTCG
GGTCAATGATTGCCTTTGAGACCGGATCGCTCGCCAACGCCAATGCAATGCTCAAGCGGGTGAAGGTCTGCACGCTGGGC
GAGTCTCTGGGGGGCGTGGAGACGCTGATTTCGCATCCGGCCACGATGACGCACGCCGCGATTGGCGAAGAGATGCGGGC
GAAGCTCGGAATCACCGACGGACTGGTGCGTATCTCCGTCGGCATCGAGGATGTCGAAGACATTCTGGCCGATCTGGACC
AGGCTCTGGCTGCGATTTCGTAG

Protein sequence :
MGFATRAIHAGQEPDPLTGAVNVPIYLTSTYAQEEIGKHKGYEYSRVSNPTRDALEVNMAALEGGTSAHVFASGMAAITA
LITMLRTGDHVICGENVYGGTPRMFNQIATRYGIEFSYVDTSDPENVRRAIRPTTRLVHIETPTNPLMTITDIRAVADVC
HEQGVELSVDNTFLTPYFQRPIEFGADIVMHSTTKFLNGHSDGLGGVLVGTKPEHKETFAFVQKCTGGILSPFECYLILR
GVKTLAVRMKQHDESGRKVAEYLAAHPKVSRVYYPGLASHPQHALAQQQASGFGSMIAFETGSLANANAMLKRVKVCTLG
ESLGGVETLISHPATMTHAAIGEEMRAKLGITDGLVRISVGIEDVEDILADLDQALAAIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-86 50
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-85 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-63 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACP_1006 YP_002754112.1 Cys/Met metabolism PLP-dependent enzyme BAC0207 Protein 3e-64 43