Gene Information

Name : BCA_3257 (BCA_3257)
Accession : YP_002750526.1
Strain : Bacillus cereus 03BB102
Genome accession: NC_012472
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3032476 - 3033150 bp
Length : 675 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGCGAGTTCTTATTGTCGAAGATGAACAAGACTTACAAAATATATTAGTAAAGCGATTAAATGCAGAACATTATAGTGT
CGATGCATGCGGGAATGGAGAAGATGCCTTAGATTATATAAACATGGCTACCTACGATTTGATCGTGCTTGACATTATGA
TTCCCGGAATAAATGGTTTACAAGTATTACAAAAATTACGCGCGGACAATCATACAACTCCTGTCTTGCTTCTTACAGCT
AAAGATACAATTGATGATCGCGTAAAAGGACTCGACTTAGGTGCGGACGATTATTTAGTAAAGCCGTTCGCTTTTGACGA
ACTGCTAGCAAGAATTCGAGTGTTAATGCGAAGAAAAACAGGAAATACATCTAATGTGTTTGAAATTGCTGACCTAGTGG
TGGATTGCAATATGCATAAAGTAACAAGAGGAGACCAAGTTATTACTCTTTCCAGTAAAGAATTTGCTATTTTAGAATAT
ATGATTCGTAATAAAGAAGTTGTGTTGACACGAGATAAAATTGAGCAACATGTGTGGAATTACGACTATGAAGGTGGCTC
AAATATTATTGATGTTTACGTCCGCTATCTTCGAAAAAAAGTTGATAGCCAGTTTGAAACGAAGTTAATTCATACAGTAA
GAGGAACTGGTTACGTATTGCGAGTAGAATCATGA

Protein sequence : 
MRVLIVEDEQDLQNILVKRLNAEHYSVDACGNGEDALDYINMATYDLIVLDIMIPGINGLQVLQKLRADNHTTPVLLLTA
KDTIDDRVKGLDLGADDYLVKPFAFDELLARIRVLMRRKTGNTSNVFEIADLVVDCNMHKVTRGDQVITLSSKEFAILEY
MIRNKEVVLTRDKIEQHVWNYDYEGGSNIIDVYVRYLRKKVDSQFETKLIHTVRGTGYVLRVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-42 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCA_3257 YP_002750526.1 DNA-binding response regulator BAC0111 Protein 2e-52 50
BCA_3257 YP_002750526.1 DNA-binding response regulator BAC0308 Protein 1e-49 49
BCA_3257 YP_002750526.1 DNA-binding response regulator BAC0347 Protein 2e-45 48
BCA_3257 YP_002750526.1 DNA-binding response regulator BAC0197 Protein 8e-50 48
BCA_3257 YP_002750526.1 DNA-binding response regulator BAC0125 Protein 3e-48 48
BCA_3257 YP_002750526.1 DNA-binding response regulator BAC0638 Protein 7e-47 48
BCA_3257 YP_002750526.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 9e-42 45
BCA_3257 YP_002750526.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 9e-42 45
BCA_3257 YP_002750526.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 9e-42 45
BCA_3257 YP_002750526.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 9e-42 45
BCA_3257 YP_002750526.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 9e-42 45
BCA_3257 YP_002750526.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 9e-42 45
BCA_3257 YP_002750526.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 9e-42 45
BCA_3257 YP_002750526.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 9e-42 45
BCA_3257 YP_002750526.1 DNA-binding response regulator BAC0083 Protein 6e-50 45
BCA_3257 YP_002750526.1 DNA-binding response regulator AE015929.1.gene1106. Protein 1e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCA_3257 YP_002750526.1 DNA-binding response regulator VFG1390 Protein 8e-49 46
BCA_3257 YP_002750526.1 DNA-binding response regulator VFG0596 Protein 1e-42 43
BCA_3257 YP_002750526.1 DNA-binding response regulator VFG1386 Protein 4e-46 42