Gene Information

Name : SEQ_1836 (SEQ_1836)
Accession : YP_002747068.1
Strain : Streptococcus equi 4047
Genome accession: NC_012471
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1845283 - 1846062 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAACAATCAGTGCTGAGAGGATTTCAGCTGGCTATGATCAATCGCTTATCATCAGCAACTTATCTGTCACTATTCC
CGAAGGAAAGGTAACAACCATCATCGGTGCTAATGGCTGTGGGAAGTCAACCCTTTTAAAGACTCTGGCACGACTATTGC
CACTCAAAGCAGGGCAGGTTCTCTTAGATGGACAAGCCATTGCTAGACTAGCAACCAAGGACGTTGCCAGAACACTAGCA
GTTTTACCTCAGCTGCAAGAAGCTACTACAGCTACTGTCTATGAGCTGGTTTCTTATGGGCGTTATCCCCACCAATCCTA
CCTAGGACAACTCAGTCAAGCTGATAAGGATAAGATTTGCTGGGCAATGGAGGTCACAAGCATGGCACCCTATGCTCATC
AGGCTGTTGATGCCCTGTCAGGCGGCCAACGTCAAAGGGCCTGGATTGCTATGGCCTTAGCACAGGATACTGATATTATT
TTTCTAGATGAGCCAACAACCTACTTAGATATGAATCATCAGCTCGATATTTTAGAATTACTAAAGGAGCTCAATCAGGT
CTCTGGAAAAACAATCGTGATGGTCCTTCATGATTTAAATCTTTCAGCACGCTACTCGGATCATCTGATCGCCATGAAAA
ATGGACATATCAAATATTCTGGAGAGGTCAACCAGGTGATGACGCCAGAGATGATTCAAGACATTTTTCAAGTAAAGGCT
CAGCTCGTCACTGATCCTCTCTATCATTGCCCTACATTGCTGACCTATCAGCTGATATAA

Protein sequence : 
MSTISAERISAGYDQSLIISNLSVTIPEGKVTTIIGANGCGKSTLLKTLARLLPLKAGQVLLDGQAIARLATKDVARTLA
VLPQLQEATTATVYELVSYGRYPHQSYLGQLSQADKDKICWAMEVTSMAPYAHQAVDALSGGQRQRAWIAMALAQDTDII
FLDEPTTYLDMNHQLDILELLKELNQVSGKTIVMVLHDLNLSARYSDHLIAMKNGHIKYSGEVNQVMTPEMIQDIFQVKA
QLVTDPLYHCPTLLTYQLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-46 49
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 48
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 48
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 48
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-48 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-44 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-45 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-45 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-45 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-46 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-46 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEQ_1836 YP_002747068.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 1e-44 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEQ_1836 YP_002747068.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 8e-48 48
SEQ_1836 YP_002747068.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 1e-44 45