Gene Information

Name : SEQ_1117 (SEQ_1117)
Accession : YP_002746426.1
Strain : Streptococcus equi 4047
Genome accession: NC_012471
Putative virulence/resistance : Virulence
Product : ATP-dependent protease ATP-binding subunit ClpL
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1105344 - 1107443 bp
Length : 2100 bp
Strand : -
Note : -

DNA sequence :
GTGTATATGGCAACCTATTATGGAAAAGACCCCTTTGAAAATATGGACGATATTTTCAATCAGTTAATGGGAAACATCGG
CGGCTACCGCAGCGAAAATCGTCGCTATCTTGTCAATGGACGTGAGATGACACCAGAGGAATTTCAAGAATACCGGAAAA
CCGGTAAGCTAGCTGCAGCTGAGGGACAAGAAAAACAGGCTAGCAGCCTTAAAAAAGACGGCATTCTAACCAAGCTCGGA
ACAAACCTGACCGAAGAAGCTCGGCAAGGCAGGTTAGATCCTGTGATCGGACGAAACGATGAGATTCAAGCGACCGCAGA
AATTCTAGCAAGACGAACCAAGAATAACCCTGTTCTTGTCGGTGACGCTGGTGTTGGTAAAACTGCTGTTGTCGAAGGCC
TAGCCCAGGCTATTGTCAACGGTGATGTGCCAGCTGCCATCAAAAATAAAGAGATTATCTCAATTGATATTTCTGGCCTT
GAGGCTGGCACACAGTATCGTGGCTCCTTTGAAGAAAACATTCAAAACATGGTTAAAGAGGTTAAGGAGGCTGGCAATAT
CATTCTCTTCTTTGACGAAATCCATCAAATCCTTGGTGCAGGGTCAGCTGGTTCAGACTCAGGCTCTAAGGGCTTAGCTG
ATATTCTAAAACCAGCCCTCTCACGCGGTGAGTTGACCCTGATTGGTGCCACAACTCAAGATGAGTATCGCAACACCATT
CTAAAAAATGCTGCTCTTGCTCGTCGTTTCAACGAGGTTAAGGTTAATGCTCCTTCAGCAGAGGATACCTTCCACATTTT
AATGGGCATTCGCAACCTCTACGAGCAGCACCACAATGTGATCCTACCAGACTCTGTCTTGAAGGCAGCTATTGATTATG
CTATCCAATATATTCCACAACGAAGCCTACCAGATAAAGCCATTGACCTTGTTGATATGACTGCTGCTCATCTAGCAGCT
CAGCACCCTGTCACTGATCTAAAATCACTTGAAGCAGAAATCACTAAGCAAAAGGAGCTACAGGAAAAGGCTGTTGCAGA
AGAAGACTTTGAAAAGGCCTTAACTGCTAAGACCCGCATTGAGGAGCTCCAAAAGCAAATCAATCATCACAGTGAAGGGC
AAAAGGTCACTGCCACTGTTAATGATATTGCAGAATCTGTTGAACGTCTAACTGGTGTTCCAGTATCAAATATGGGGGCT
AGTGATTTAGAAAGGCTCAAGGAAATCAGTAACCGTCTTAAAGGCCATGTTATCGGACAAGATGGTGCAGTTGAGGCTGT
TGCTCGTGCGATTCGACGCAACCGCGCAGGCTTTGATGACGGTAATCGCCCAATTGGCTCCTTCCTCTTTGTTGGTCCAA
CTGGTGTTGGTAAGACCGAGCTGGCTAAGCAGTTAGCCCTTGATATGTTCGGCTCAAAGGACGCTATCATTCGCTTAGAT
ATGTCTGAATATAGTGACCGCACAGCTGTTTCCAAATTAATCGGAACAACAGCTGGCTATGTTGGCTATGATGATAATCA
AAATACCCTTACAGAACGTGTCCGTCGCAGTCCTTACTCTATCATCTTGCTTGATGAAATCGAAAAAGCAGACCCACAGG
TCATTACACTGCTTCTTCAAGTGCTTGATGATGGGCGATTGACAGATGGACAAGGCAACACGATCAATTTCAAAAATACG
GTTATCATCGCAACCTCTAATGCTGGTTTTGGCCATCAAGCAGGAGATCGTGCTGATCAAGAGCCTGCTATCATGGAGCG
TATTGCACCTTACTTTAGACCAGAATTCTTGAATCGCTTCAACGGTGTCATCGAATTCAACCATTTAGCGAAAAAGGATT
TACAAGAAATTGTTGCTTTAATGCTAACAGAAGTGAACCAAACCCTTGCTAAAAAAGGCATTAGCCTTGAGGTGACTGAC
GATGTTAAAGAGCGTTTGATTGATCTGGGCTATGATCATGCGATGGGAGTTCGTCCACTTAGACGTGTCATCGAACAAGA
AATTCGTGACCGCATTACGGATTACTACCTGGATCACCCGACTGCTAAACACCTATTAGCAAGCCTTGATCAAGATACTA
TTACGATAAGTGAGAAGTAA

Protein sequence :
MYMATYYGKDPFENMDDIFNQLMGNIGGYRSENRRYLVNGREMTPEEFQEYRKTGKLAAAEGQEKQASSLKKDGILTKLG
TNLTEEARQGRLDPVIGRNDEIQATAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGL
EAGTQYRGSFEENIQNMVKEVKEAGNIILFFDEIHQILGAGSAGSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTFHILMGIRNLYEQHHNVILPDSVLKAAIDYAIQYIPQRSLPDKAIDLVDMTAAHLAA
QHPVTDLKSLEAEITKQKELQEKAVAEEDFEKALTAKTRIEELQKQINHHSEGQKVTATVNDIAESVERLTGVPVSNMGA
SDLERLKEISNRLKGHVIGQDGAVEAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNQNTLTERVRRSPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTINFKNT
VIIATSNAGFGHQAGDRADQEPAIMERIAPYFRPEFLNRFNGVIEFNHLAKKDLQEIVALMLTEVNQTLAKKGISLEVTD
DVKERLIDLGYDHAMGVRPLRRVIEQEIRDRITDYYLDHPTAKHLLASLDQDTITISEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-127 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEQ_1117 YP_002746426.1 ATP-dependent protease ATP-binding subunit ClpL VFG0080 Protein 7e-150 48
SEQ_1117 YP_002746426.1 ATP-dependent protease ATP-binding subunit ClpL VFG0079 Protein 2e-132 44