Gene Information

Name : SZO_08500 (SZO_08500)
Accession : YP_002744377.1
Strain : Streptococcus equi H70
Genome accession: NC_012470
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 951445 - 952155 bp
Length : 711 bp
Strand : +
Note : Ortholog of S. equi 4047 (FM204883) SEQ1311

DNA sequence : 
GTGCCAGATGAGAAAAAAGAATTAATACAATTAAAAAACATTGTTAAAAGCTATCAAAATGGTGATCAGGAGCTACAGGT
CCTAAAAGGCGTGGATTTGACTGTATATGAAGGTGAATTTGTCGCTATTATGGGGCCTTCTGGCTCAGGAAAATCAACCC
TGATGAATATTATTGGCTTATTAGATAGACCGACCTCAGGTGATTATCGTCTCAATGGGACTCAGGTTGAGCTCTTAAAT
GATCGAAAGCTAGCTAAGGTGAGAAACGAAGAGATCGGCTTTGTCTTTCAGCAGTTCTTTTTACTAGCAAAGCTAAATGC
CCTGCAAAATGTTGAGCTTCCTTTGATTTATGCGGGAGTTGGGGTATCAAAGCGTCGTGAATTGGCTAAGCAATTTTTAG
AAAAGGTTGAGCTTGGTATGCGAATGAAGCATTTGCCATCGGAGTTATCAGGTGGTCAAAAGCAGCGGGTTGCGATTGCA
AGAGCTTTGGTTAATAGCCCGTCTATTATCTTAGCTGATGAGCCAACTGGTGCCTTAGATACAAAGACTGGTGAGCAGAT
TATGAGGCTTTTGACGGAGCTGAATAAGGAAGGAAAAACCATTATTATGGTTACTCATGAGCCGGAGATTGCGGACTTTG
CCACTCGAAAAATTGTTATTCGTGATGGTGAAATCACAGCTGATACAACAGAAAGTGTCAGAATTGACTAG

Protein sequence : 
MPDEKKELIQLKNIVKSYQNGDQELQVLKGVDLTVYEGEFVAIMGPSGSGKSTLMNIIGLLDRPTSGDYRLNGTQVELLN
DRKLAKVRNEEIGFVFQQFFLLAKLNALQNVELPLIYAGVGVSKRRELAKQFLEKVELGMRMKHLPSELSGGQKQRVAIA
RALVNSPSIILADEPTGALDTKTGEQIMRLLTELNKEGKTIIMVTHEPEIADFATRKIVIRDGEITADTTESVRID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-37 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-33 42
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SZO_08500 YP_002744377.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-83 77
SZO_08500 YP_002744377.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-45 48
SZO_08500 YP_002744377.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-38 45
SZO_08500 YP_002744377.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-35 43