Gene Information

Name : SZO_03540 (SZO_03540)
Accession : YP_002743912.1
Strain : Streptococcus equi H70
Genome accession: NC_012470
Putative virulence/resistance : Virulence
Product : ferrichrome transport ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 408852 - 409631 bp
Length : 780 bp
Strand : -
Note : Ortholog of S. equi 4047 (FM204883) SEQ1836

DNA sequence : 
ATGTCAACAATCAGTGCTGAGAGGATTTCAGCTGGCTATGATCAATCGCTTATCATCAGCAACTTATCTGTCACTATTCC
CGAAGGAAAGGTAACAACCATCATCGGTGCTAATGGCTGTGGGAAGTCAACCCTTTTAAAGGCTCTGGCACGACTATTGC
CACTCAAAGCAGGGCAGGTTCTCTTAGATGGACAAGCCATTGCTAGACTAGCAACCAAGGACGTTGCCAGAACACTAGCA
GTCTTACCTCAGCTGCAAGAAGCTACTACAGCTACTGTCTATGAGCTGGTTTCTTATGGGCGTTATCCCCACCAATCCTA
CCTAGGACGGCTCAGTCAAGCTGATAAGGATAAGATTTGCTGGGCAATGGAGGTCACAAGCATGGCACCCTATGCTCATC
AGGCTGTTGATGCCCTGTCAGGCGGCCAACGTCAAAGGGCCTGGATTGCTATGGCCTTAGCACAGGATACTGATATTATT
TTTCTAGATGAGCCAACAACCTACTTAGATATGAATCATCAGCTCGATATTTTAGAATTACTAAAGGAGCTCAATCAGGT
CTCTGGAAAAACAATCGTGATGGTCCTTCATGATTTAAATCTTTCAGCACGCTACTCAGATCATCTGATCGCCATGAAAA
ATGGAGATATCAAATATTCTGGAGAGGTTAATCAGGTGATGACGCCAGAGATGATACAAGACATTTTTCAGATAAAGGCT
CAGCTCGTCACTGACCCTCTCTATCATTGCCCTACATTGCTGACCTATCAGCTGATATAA

Protein sequence : 
MSTISAERISAGYDQSLIISNLSVTIPEGKVTTIIGANGCGKSTLLKALARLLPLKAGQVLLDGQAIARLATKDVARTLA
VLPQLQEATTATVYELVSYGRYPHQSYLGRLSQADKDKICWAMEVTSMAPYAHQAVDALSGGQRQRAWIAMALAQDTDII
FLDEPTTYLDMNHQLDILELLKELNQVSGKTIVMVLHDLNLSARYSDHLIAMKNGDIKYSGEVNQVMTPEMIQDIFQIKA
QLVTDPLYHCPTLLTYQLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-47 49
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-47 49
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-47 49
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-47 49
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-47 49
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-48 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-44 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-45 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-45 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-46 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-46 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SZO_03540 YP_002743912.1 ferrichrome transport ATP-binding protein BAC0164 Protein 1e-44 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SZO_03540 YP_002743912.1 ferrichrome transport ATP-binding protein VFG0925 Protein 9e-49 48
SZO_03540 YP_002743912.1 ferrichrome transport ATP-binding protein VFG1042 Protein 1e-44 45