Gene Information

Name : SZO_01210 (SZO_01210)
Accession : YP_002743683.1
Strain : Streptococcus equi H70
Genome accession: NC_012470
Putative virulence/resistance : Virulence
Product : stress response-related Clp ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 138148 - 140586 bp
Length : 2439 bp
Strand : +
Note : Ortholog of S. equi 4047 (FM204883) SEQ0201

DNA sequence :
ATGATTTATTCATTAAAGATGCAAGACATTTTTAATCAGGCTCAATTTCAAGCAGAGCGCTTTGATAGTCCTTACCTTGA
GACCTGGCATATTTTATTGGCTATGGTGGCTGTTGACCATTCCTTAGCGGCCATGGTGTTAAGCGAATTTGAACGAAAGA
TTAGGGCTGAAGAGTATGAGGCTGCTGCTATTTTAGCCATGGGAAAAAGTCCCAAAGAGGTGACTTCTGTCCAATTCAAG
CCACAATCCAAGGCCTTATCAGAAATACTAGCATTTGCTCATGCTATCTGTCAGGTCACCAATGAGCATGAGGTTGGCTC
AGAGCATGTGCTTTTTGCTATTTTGCTCAATCCGGACATTATGGCTAGTCGTCTATTAGAATTGGCAGGCTATAGGCTTA
AGGATTCTGGCAAGGGAGAGCCTAGGTTTGCGGATTTACGTAAGGCTATTGAGTTAAATGCCGGCTATAGTAAGGAAACC
ATTAAGGCGATTCATGAGTTGCGTAAGCCTAAAAAGACGAAATCAGTAGGCACCTTTTCTGAAATGATGAAGCCACAGAG
TACAGCTGGTGAGCTATCAGACTTTACTAGAGACCTGACAGAGATGGCAAGACAGGGCTTGTTAGAGCCAGTTATCGGAC
GAGAAAAAGAGGTGTCACGTATGGTTCAGGTGCTCTGTCGTAAGACTAAAAATAATCCTGTTCTTGTTGGTGATGCGGGT
GTTGGAAAAACTGCTCTAGCTTATGGCTTGGCACAGCGTATTGCAAGCGGCGTGATTCCTTATGAATTACAGGACATGCG
TGTCTTGGAGCTTGACATGATGAGTGTGGTTGCAGGTACCCGTTTTCGTGGGGATTTTGAAGAGCGCATGAATCAACTCA
TTGACGATATTGAAGCAGATGGCAAAATCATCTTGTTTGTCGATGAGCTACATACCATTATGGGATCAGGAAGTGGTATT
GACAGCACTCTTGATGCAGCTAATATTCTAAAGCCAGCCCTTTCTCGCGGTACCCTGCATATGGTTGGCGCTACAACTCA
AGAGGAATATCAAAAGCATATTGAAAAGGACGCAGCCCTTTCTCGTCGCTTTGCCAAAATATTGATTGAGGAGCCTAGTG
TTGAGGACGCTTATCAGATTTTGCTTGGCTTGAAGCCTTCCTATGAACAGTACCATAATGTAACAATCTCTGATACAACT
GTCCATACTGCTGTGAAGCTGGCTCGGCGCTATTTGACAAGTAAGCAGCTTCCAGACTCAGCGATTGATCTGCTTGATGA
AGCCAGTGCGATGGTGCAAAGTATGGTTAAAAAGACGCAGCCTGACTTTATAACACCGCTTGATCAAGCCCTGCTTGATG
GTGATATGAGCAAGGTGTCAGCCCTTTTAGCCAAAGAGGATAAGCAACCAAAGCTAAAACCAACAGCAGTCACTGAAGAT
GATATGTTACACACCTTAAGCAAGCTATCAGGTATTCCCCTAGAAAAACTAACTCAGGCGGATAGTAAAAAATACCTGAA
TCTGGAAAAGAAATTGCATAAGCGTGTTGTTGGTCAGGAAATGGCTGTTTCTGCTATTGCACGAGCCATTCGTCGTAACC
AGTCAGGCATTCGCACAGGCAGGCGTCCGATTGGCTCCTTTATGTTTCTTGGTCCAACCGGTGTCGGAAAAACAGAGCTA
GCAAAGGCCTTGGCCGAATTACTCTTTGATGATGAGTCAGCCCTTATTCGTTTTGATATGTCTGAGTACATGGAAAAATT
TGCAGCCTCCCGTCTTAATGGGGCTCCTCCTGGCTATGTTGGCTATGATGAGGGAGGAGAGCTAACCGAAAAGGTTAGAA
ATAAGCCTTATGCCGTTCTTCTTTTTGATGAGGTTGAAAAGGCTCACCCAGACATCTTTAATATCCTGCTGCAGGTCCTT
GATGATGGTATGTTAACAGATAGTCGTGGACGTAAGGTTGATTTTTCAAACACGATTATTATCATGACGAGCAACCTAGG
AGCAACTGCTCTAAGAGATGATAAGACGGTTGGATTTGGCGCTAAAGCGATCGGTCATGACCATCAAGCAATGGAAAAGC
GTATTTTAGAGGAATTGAAAAAGGCTTATCGGCCTGAATTTATCAACAGAATTGATGAGAAGGTGGTCTTCCATAGCCTA
ACACAAGAAAACATGCGTGATGTGGTGAAAATTATGGTTAAGCCGCTGATTGCAGCCTTGGCAGAAAAGCATATTAGCCT
TAAGTTCCAGCCATCAGCTTTCAAGTACTTGTCTGAAGCTGGTTACGATGTTGAAATGGGGGCTCGCCCACTTCGTCGCA
CCTTGCAAACAGAGGTTGAGGACAGGTTAGCAGAATTAATGCTGTCAGGAGAGTTATCAAGCGGTCAAAGCCTCAAGATT
GGTGTATCACGTGGGAAGTTAGCTTTTGATATTGCTTGA

Protein sequence :
MIYSLKMQDIFNQAQFQAERFDSPYLETWHILLAMVAVDHSLAAMVLSEFERKIRAEEYEAAAILAMGKSPKEVTSVQFK
PQSKALSEILAFAHAICQVTNEHEVGSEHVLFAILLNPDIMASRLLELAGYRLKDSGKGEPRFADLRKAIELNAGYSKET
IKAIHELRKPKKTKSVGTFSEMMKPQSTAGELSDFTRDLTEMARQGLLEPVIGREKEVSRMVQVLCRKTKNNPVLVGDAG
VGKTALAYGLAQRIASGVIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQLIDDIEADGKIILFVDELHTIMGSGSGI
DSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPSVEDAYQILLGLKPSYEQYHNVTISDTT
VHTAVKLARRYLTSKQLPDSAIDLLDEASAMVQSMVKKTQPDFITPLDQALLDGDMSKVSALLAKEDKQPKLKPTAVTED
DMLHTLSKLSGIPLEKLTQADSKKYLNLEKKLHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTEL
AKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYAVLLFDEVEKAHPDIFNILLQVL
DDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKAIGHDHQAMEKRILEELKKAYRPEFINRIDEKVVFHSL
TQENMRDVVKIMVKPLIAALAEKHISLKFQPSAFKYLSEAGYDVEMGARPLRRTLQTEVEDRLAELMLSGELSSGQSLKI
GVSRGKLAFDIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-146 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SZO_01210 YP_002743683.1 stress response-related Clp ATPase VFG0079 Protein 2e-169 45
SZO_01210 YP_002743683.1 stress response-related Clp ATPase VFG0080 Protein 4e-127 44