|
Name : SZO_12860 (SZO_12860) Accession : YP_002744803.1 Strain : Streptococcus equi H70 Genome accession: NC_012470 Putative virulence/resistance : Virulence Product : conjugal transfer protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 1434098 - 1436524 bp Length : 2427 bp Strand : - Note : Ortholog of S. equi 4047 (FM204883) SEQ0742; Similar to Clostridium difficile (strain 630) conjugal transfer protein UniProt:Q188K2 (EMBL:AM180355) (797 aa) fasta scores: E()=0, 96.7% id in 796 aa DNA sequence : TTGAACAAGAAAAGAAAAATTCAGCAAATAAAGTTAGAAGAAAACAAAAAGGCACTGAGAAGTCAAAAGCGGGACTTAAA GCAAAATAAGGGAAAGATTAAAAAAGACAGTAATATACTTGACCTTATTTTTAAGAAAGAGCCGAAAAGATACACTGTTG AAGATACCATTCCCTATCTTAGACTCTTAAAAAGCGGGATATGCCAGCTCGATGAAAAGCACTTCAGTAAAAGCATAGCC TTTCAGGACATTAACTATCAGCTTGCTTTAGATGAAGATAGGGATTTGATTTTTAATCAGTTTGCCAATTTCTTAAATTC CTTTGATCCAAGCATAGCGATTGAGTTTTCCTACATCAATCAGCTTGGACGAAACGAAGAAATGAAATCGGCAATTCAGA TACCGAATAAAGGGGACGGATTTGACGATATACGACTTGAGTTTAGAGAGATGCTAAAAAGTCAGATTGTAAAAGGAAAT AACGGACTGAAAAAATCAAAGTATGTAACCTTTACAGTAGAGGCAGACAATTTTGAACAGGCAACATCAAAACTTGAAAG ACTGGAGATAGATATATTATCTAATCTAAAAGGCATGGGGGTAAGAGCTGAAAGTCTTACCGGAGAAGAAAGGCTAAAGA TTCTTCACGATATATTAAATCCGAATAAGACCTTTGAGTTTTCCTATAAAGACCTGAAGAAAAAGGAAAGTACCAAAACA TATATCGTGCCTGATGAATTTAACTTTATGCCAAGCAGGTATTTCAAGTTTGGGAAGTTTATCGGAGCAACAAGTCATTT TCAAATCCTTGCAAGTGAGCTTTCAGACCGTATGTTATCGGAGTTTTTGGATATTGATGATAACATCAATATATCTTTTC ATATTAAGGCGATTGACCAGTCAGAAGCCATCAAGATGGTAAAACGAAAAAACACCGATATTGACAAGATGCGAATTGAG GAAAACAAGAAAGCTGTAAGGTCAGGCTATGACATGGACATTCTTCCAAGTGATTTAATTACTTACGGAGAAGATGTAAA AAGTCTTTTAAAAGATTTACAGACAAGAGATGAGCGTATGTTTGTTGTAAGTATTGTCTTTATGAATTTTGCAAGGACAG TGCAGAAGCTCGATAACACCATAGCTCAGATAAGCTCCATTGCAAACAAGCATAACTGTAAATTGAAAAGACTTGACCAT ACGCAGGAACAAGGCTTAGTGAGCGTGCTGCCTCTTGGGGTAAACAAGATTGAAATAGATAGAGGGCTAACCTCATCATC AACAGCAGTCTTTATGCCATTTACCACAGAGGAACTTTTTATCAACTCAAGTAACAGTCTGTACTATGGACTAAATGCTT TAAGTCATAACCTGATTATGGCGGACAGGAAGAAATTAAAGAACCCGAACGGCTTAATTTTAGGGACTCCCGGAAGTGGT AAATCCTTTAGCGCTAAAAGGGAGATGGCAAATGCGATTTTAGTAACGGACGATGATGTGATTATTTGCGATCCGGAGGG AGAGTATGGAAACCTTGTAAGACAGTTTAAGGGAGAAGTGATAAAGGTTAGCAGTAAGTCAAAAGACTACTTAAATCCCC TTGATATAAACATGAACTATGGCGATGGAGATGCACCTCTTAAAGACAAGGCAAATTTCATTATGTCCATGCTTGAACTT GTAGTTGGAGGAAGCGGACTTACGGCAGAAGAAAAGTCGGTAATAGATAGGTGCCTTCCTAAAATTTATGAAAAGTATTT TGAAAATCCGACTCCTGACAATATGCCGATTCTTCAAGACCTATACGATATGTTAAAAGGGCAGGAAGAAAAGGTTGGTA AGAAGCTGGCAACGGAGATGGAAATATATGTATCAGGTTCTCTTAATGTCTTTAATCACAGGTCAAATGTGGACTTAAAT AAGAAGCTGCTTTGCTTTGATATTAAAGAGCTTGGAAGCCAGCTTAAAAAAATCGGTATGCTTGTCATTCAGGATCAGGT GTGGAATAAGGTATCGCAAAACAGAGGAAACAAGGCTACAAGGTACTATATAGATGAATTTCACTTGCTGTTAAAAGATG AGCAGACAGCTTCATACTCGGTTGAGATATGGAAGCGTTTCAGAAAATGGGGAGGTATCCCGACGGGTATCACGCAGAAT GTCAAAGACCTGCTTATGAGTAAGGAAATAGAAAACATCTTTGATAATACGGACTTTGTCTTAATGCTAAATCAGGCTTC GGGAGATAGAGAAATCTTAGCAAGAAAACTTAAAATCTCACTTCCACAGCTTCGGTATGTAACTAACTCCAATGAGGGCG AGGGATTACTTTTCTTTGGAAATACCATTGTGCCTTTCCTTGATAAATTTCCGAAAGATACTATTCTTTATCAGAAGATG ACTACCAAGCCTGAAGAAGTGAGGTAG Protein sequence : MNKKRKIQQIKLEENKKALRSQKRDLKQNKGKIKKDSNILDLIFKKEPKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIA FQDINYQLALDEDRDLIFNQFANFLNSFDPSIAIEFSYINQLGRNEEMKSAIQIPNKGDGFDDIRLEFREMLKSQIVKGN NGLKKSKYVTFTVEADNFEQATSKLERLEIDILSNLKGMGVRAESLTGEERLKILHDILNPNKTFEFSYKDLKKKESTKT YIVPDEFNFMPSRYFKFGKFIGATSHFQILASELSDRMLSEFLDIDDNINISFHIKAIDQSEAIKMVKRKNTDIDKMRIE ENKKAVRSGYDMDILPSDLITYGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDH TQEQGLVSVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMADRKKLKNPNGLILGTPGSG KSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVIKVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLEL VVGGSGLTAEEKSVIDRCLPKIYEKYFENPTPDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLN KKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGNKATRYYIDEFHLLLKDEQTASYSVEIWKRFRKWGGIPTGITQN VKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKISLPQLRYVTNSNEGEGLLFFGNTIVPFLDKFPKDTILYQKM TTKPEEVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2320 | NP_815976.1 | traE protein | Not tested | Not named | Protein | 0.0 | 57 |
| EFAU085_00716 | YP_008394240.1 | Type IV secretory pathway, VirB4 component | Virulence | Not named | Protein | 0.0 | 51 |
