Gene Information

Name : SPT_1590 (SPT_1590)
Accession : YP_002742988.1
Strain : Streptococcus pneumoniae Taiwan19F-14
Genome accession: NC_012469
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding lipoprotein (Adhesin B) (Saliva-binding protein)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1509832 - 1510761 bp
Length : 930 bp
Strand : +
Note : identified by match to protein family HMM PF01297

DNA sequence :
ATGAAAAAATTAGGTACATTACTCGTTCTCTTTCTTTCTGCAATCATTCTTGTAGCATGTGCTAGCGGAAAAAAAGATAC
AACTTCTGGTCAAAAACTAAAAGTTGTTGCTACAAACTCAATCATCGCTGATATTACTAAAAATATTGCTGGTGACAAAA
TTGACCTTCATAGTATCGTTCCGATTGGGCAAGACCCACACGAATACGAACCACTTCCTGAAGACGTTAAGAAAACTTCT
GAGGCTGATTTGATTTTCTATAACGGTATCAACCTTGAAACAGGTGGCAATGCTTGGTTTACAAAATTAGTAGAAAATGC
CAAGAAAACTGAAAACAAAGACTACTTCGCAGTCAGCGACGGCGTTGATGTTATCTACCTTGAAGGTCAAAATGAAAAAG
GAAAAGAAGACCCACACGCTTGGCTTAACCTTGAAAACGGTATTATTTTTGCTAAAAATATCGCCAAACAATTGAGCGCC
AAAGACCCTAACAATAAAGAATTCTATGAAAAAAATCTCAAAGAATATACTGATAAGTTAGACAAACTTGATAAAGAAAG
TAAGGATAAATTTAATAAGATCCCTGCTGAAAAGAAACTCATTGTAACCAGCGAAGGAGCATTCAAATACTTCTCTAAAG
CCTATGGTGTTCCAAGTGCCTACATCTGGGAAATCAATACTGAAGAAGAAGGAACTCCTGAACAAATCAAGACCTTGGTT
GAAAAACTTCGCCAAACAAAAGTTCCATCACTCTTTGTAGAATCAAGTGTGGATGACCGTCCAATGAAAACTGTTTCTCA
AGACACAAACATCCCAATCTACGCACAAATCTTTACTGACTCTATCGCAGAACAAGGTAAAGAAGGCGACAGCTACTACA
GCATGATGAAATACAACCTTGACAAGATTGCTGAAGGATTGGCAAAATAA

Protein sequence :
MKKLGTLLVLFLSAIILVACASGKKDTTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTS
EADLIFYNGINLETGGNAWFTKLVENAKKTENKDYFAVSDGVDVIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSA
KDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLV
EKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 6e-105 78
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 5e-105 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPT_1590 YP_002742988.1 manganese ABC transporter substrate-binding lipoprotein (Adhesin B) (Saliva-binding protein) VFG1359 Protein 6e-132 99
SPT_1590 YP_002742988.1 manganese ABC transporter substrate-binding lipoprotein (Adhesin B) (Saliva-binding protein) VFG2165 Protein 2e-81 58
SPT_1590 YP_002742988.1 manganese ABC transporter substrate-binding lipoprotein (Adhesin B) (Saliva-binding protein) VFG2157 Protein 6e-76 53