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Name : SPT_1293 (SPT_1293) Accession : YP_002742709.1 Strain : Streptococcus pneumoniae Taiwan19F-14 Genome accession: NC_012469 Putative virulence/resistance : Unknown Product : S1 RNA binding domain protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1226944 - 1229073 bp Length : 2130 bp Strand : - Note : identified by match to protein family HMM PF00575 DNA sequence : ATGGATAAAAAATATGAAAAAATCTCTCAGGATTTGGGAGTGACGTTAAAGCAAATTGATACCGTTCTAAGTTTGACAGC TGAAGGGGCGACTATTCCCTTTATCGCGCGTTATCGCAAGGACATGACTGGTAGTCTGGATGAGGTGGCGATTAAGGCTA TTATTGATTTGGATAAAAGTCTGACAAATCTCAATGACCGTAAGGAAGCTGTCTTAGCTAAGATTCAAGAACAAGGTAAG TTGACCAAGGAATTGGAAGAAGCTATCTTAGTTGCCGAAAAATTAGCAGACGTTGAAGAACTCTATCTTCCTTATAAGGA AAAGCGTCGTACCAAGGCAACCATTGCCCGTGAAGCTGGACTCTTTCCTCTTGCTCGCTTGATTTTGCAGAATATAGTTG ACTTAGAGAAAGAAGCTGAAAAGTTCGTCTGTGAAGGATTTGCGACTGGCAAGGAAGCCTTGACCGGTGCAGTTGATATT TTGGTCGAAGCCTTATCGGAAGATGTGACCTTGCGTTCTATGACTTATCAGGAAGTGCTGAGACACTCTAAACTCACTTC TCAAGCCAAGGATGAAAGTCTTGATGAAAAGCAGGTTTTTCAGATTTATTATGATTTTTCAGAGACAGTTGGAACTATGC AAGGCTATCGTACCTTGGCTCTCAATCGTGGGGAGAAACTTGGTGTCTTGAAGATCGGTTTTGAACATGCGACGGACCGT ATTCTTGCCTTCTTTGCTACTCGTTTCAAGGTGAAAAATGCTTATATTGATGAAGTTGTTCAGCAATCCGTTAAGAAAAA GGTCTTGCCTGCTATTGAGCGTCGTATTCGGACAGAATTAACTGAGAAAGCTGAAGAGGGAGCTATCCAACTTTTTTCTG ACAATCTGCGCAATCTCCTCTTGGTTGCTCCACTGAAAGGGCGCGTGGTTCTTGGGTTTGACCCAGCCTTTCGTACAGGT GCCAAGCTAGCTGTCGTGGATGCAACAGGAAAAATGCTGACAACTCAGGTTATTTATCCTGTTAAACCAGCATCAGCTCG TCAAATCGAAGAAGCCAAGAAAGATTTAGCAGATTTAATTGGTCAATACGGTGTAGAGATTATTGCCATTGGAAATGGAA CGGCCAGTCGTGAAAGTGAAGCTTTTGTAGCGGAAGTTCTGAAAGATTTCCCTGAAGTCAGCTATGTTATCGTTAATGAA AGTGGTGCTTCTGTCTATTCTGCCAGCGAACTTGCTCGTCAGGAGTTTCCAGACTTGACCGTTGAAAAACGCTCTGCCAT TTCTATCGCCCGTCGTTTGCAAGATCCTCTTGCGGAATTGGTCAAAATCGATCCTAAGTCAATTGGTGTCGGTCAATACC AACACGATGTCAGTCAGAAGAAACTATCTGAGAGTCTGGACTTTGTTGTCGATACAGTGGTTAACCAAGTTGGTGTCAAT GTCAATACAGCTAGCCCAGCTCTTCTTTCACACGTAGCTGGACTCAATAAAACCATTTCTGAAAATATCGTCAAATACCG TGAGGAAGAGGGAAAAATCACTTCACGCTCTCAAATCAAGAAAGTTCCTCGTTTGGGGGCCAAGGCTTTTGAACAGGCTG CTGGTTTCCTCCGTATCCCTGAAAGTAGCAATATCCTTGATAATACAGGAGTTCACCCAGAAAATTACGCTGCCGTTAAG GAACTCTTCAAATGCTTGGACATTAAGGATCTGAATGAAGAGGCCCAAAGTAAACTCAAGTCGCTTTCAGTCAAGGAAAT GGCGCAAGAGTTAGACCTTGGTCCAGAAACTCTTAAAGATATCATTGCAGATCTTCTCAAACCAGGTCGAGATTTCCGTG ATTCCTTTGATGCTCCAGTTCTCCGTCAAGATGTCCTAGATATCAAGGACTTAGTGGTTGGACAAAAGCTAGAAGGAGTG GTGCGTAATGTTGTTGATTTCGGTGCTTTTGTTGATATCGGAATTCATGAGGACGGTCTCATCCATATTTCCCATATGAG TCGCAAGTTTATCAAACACCCTAGTCAAGTGGTGGCAGTTGGAGATTTGGTGAGCGTTTGGGTTAAGAAAATTGATACTG AACGTGAAAAAGTTAATCTGTCTCTCCTAGCTCCAAATGAAACTGACTGA Protein sequence : MDKKYEKISQDLGVTLKQIDTVLSLTAEGATIPFIARYRKDMTGSLDEVAIKAIIDLDKSLTNLNDRKEAVLAKIQEQGK LTKELEEAILVAEKLADVEELYLPYKEKRRTKATIAREAGLFPLARLILQNIVDLEKEAEKFVCEGFATGKEALTGAVDI LVEALSEDVTLRSMTYQEVLRHSKLTSQAKDESLDEKQVFQIYYDFSETVGTMQGYRTLALNRGEKLGVLKIGFEHATDR ILAFFATRFKVKNAYIDEVVQQSVKKKVLPAIERRIRTELTEKAEEGAIQLFSDNLRNLLLVAPLKGRVVLGFDPAFRTG AKLAVVDATGKMLTTQVIYPVKPASARQIEEAKKDLADLIGQYGVEIIAIGNGTASRESEAFVAEVLKDFPEVSYVIVNE SGASVYSASELARQEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSESLDFVVDTVVNQVGVN VNTASPALLSHVAGLNKTISENIVKYREEEGKITSRSQIKKVPRLGAKAFEQAAGFLRIPESSNILDNTGVHPENYAAVK ELFKCLDIKDLNEEAQSKLKSLSVKEMAQELDLGPETLKDIIADLLKPGRDFRDSFDAPVLRQDVLDIKDLVVGQKLEGV VRNVVDFGAFVDIGIHEDGLIHISHMSRKFIKHPSQVVAVGDLVSVWVKKIDTEREKVNLSLLAPNETD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-132 | 45 |
