|
Name : SP70585_1917 (SP70585_1917) Accession : YP_002741134.1 Strain : Streptococcus pneumoniae 70585 Genome accession: NC_012468 Putative virulence/resistance : Resistance Product : choline transport ATP-binding protein opuBA Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 1781303 - 1782031 bp Length : 729 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGATTGAATACAAAAATGTAGCACTGCGCTACACAGAAAAGGATGTCTTGAGAGATGTCAACTTACAGATTGAGGATGG GGAATTTATGGTTTTAGTAGGGCCTTCTGGATCAGGTAAGACGACCATGCTCAAGATGATTAACCGTCTTTTGGAACCAA CTGATGGAAATATTTATATGGATGGGAAGCGCATCAAAGACTATGATGAGCGTGAACTTCGTCTTTCTACTGGTTATGTT TTACAGGCTATTGCTCTTTTTCCAAATCTAACAGTTGCGGAAAATATTGCTCTCATTCCTGAAATGAAGGGGTGGAGCAA GGAAGAAATTACGAAGAAAACAGAAGAGCTTTTGGCTAAGGTTGGTTTACCAGTAGCCGAGTATGGGCATCGCTTACCTA GTGAATTATCTGGTGGAGAACAGCAACGGGTCGGTATTGTCCGAGCTATGATTGGTCAGCCCAAGATTTTCCTCATGGAT GAACCCTTTTCGGCCTTGGATGCTATTTCGAGAAAACAGTTGCAGGTTCTGACAAAAGAATTGCATAAAGAGTTTGGGAT GACAACGATTTTTGTAACCCATGATACGGATGAAGCCTTGAAGTTGGCGGACCGTATTGCTGTCTTGCAGGATGGAGAAA TTCGCCAGGTAGCGAATCCCGAGACAATTTTAAAAGCGCCTGCAACAGACTTTGTAGCAGACTTGTTTGGAGGTAGTGTT CATGACTAA Protein sequence : MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYMDGKRIKDYDERELRLSTGYV LQAIALFPNLTVAENIALIPEMKGWSKEEITKKTEELLAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMD EPFSALDAISRKQLQVLTKELHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVANPETILKAPATDFVADLFGGSV HD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-40 | 46 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 7e-41 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SP70585_1917 | YP_002741134.1 | choline transport ATP-binding protein opuBA | NC_012469.1.7686878. | Protein | 1e-24 | 41 |
