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Name : SP70585_0166 (SP70585_0166) Accession : YP_002739477.1 Strain : Streptococcus pneumoniae 70585 Genome accession: NC_012468 Putative virulence/resistance : Virulence Product : CapD protein, required for the biosynthesis of type 1 capsular polysaccharide Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 141208 - 143058 bp Length : 1851 bp Strand : + Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGAATAAAAAACTCACAGATTATGTGATTGATCTGGTGGAAATTTTAAATAAACAACAAAAGCAGGTTTTCTGGGGAAT ATTTGATATTTTCAGTATGGTGGTTTCCATCATTGTATCTTATATTTTATTTTATGGGCTGATTAATCCAGCACCTGTTG ACTACATTATCTATACGAGTTTGACCTTCCTGTTCTATCAATTGATGATTGGTTTTTGGGGCTTGAACGCGAGTATTAGT CGTTACAGCAAGATTACGGATTTCATGAAAATCTTTTTTGGTGCGACTGCCAGCAGTATCCTGTCATATAGTATCTGCTA TGCCTTCTTGCCACTCTTCTCCATCCGTTTCATCATTCTCTTTATCTTGTTGAGTACCTTCTTGATTTTATTGCCACGGA TTACTTGGCAGTTAATCTACTCCAGACGCAAAAAAGGTAGTGGTGATGGAGAACACCGTCGTACCTTCTTGATTGGTGCT GGTGATGGTGGGGCTCTCTTTATGGATAGCTACCAACATCCAACTAGTGAATTGGAACTTGTTGGTATTTTGGATAAGGA TGCTAAGAAAAAGGGTCAAAGACTTGGTGGTATCCCTGTTTTAGGCTCTTATGACAATCTGTCTGAATTAGCCAAACGCC ATCAAATCGAGCGTGTCATCGTTGCGATTCCGTCGCTGGATCCGTTAGAATATGAGCGTATCTTGCAGATGTGTAATAAG CTGGGTGTCAAATGTTACAAGATGCCTAAGGTTGAAACTGTTGTTCAGGGCCTTCACCAAGCAGGTACTGGCTTCCAAAA AATTGATATTACGGACCTTTTGGGTCGTCAGGAAATCCGTCTTGACGAATCGCGTCTGGGTGCAGAACTGACAGGTAAGA CCATCTTAGTCACAGGAGCTGGAGGTTCAATCGGTTCTGAAATCTGTCGTCAAGTTAGTCGCTTCAATCCTGAACGCATT GTCTTGCTCGGTCATGGGGAAAACTCAATCTACCTTGTTTATCATGAATTAATTCGTGAGATCCAAGGGATTGATTATGT ACCTGTGATTGCGGACATTCAAGACTATGATCGTTTGTTGCAAGTCTTTGAGCAGTACAAACCTGCTATTGTTTATCATG CGGCAGCCCACAAGCATGTTCCTATGATGGAGCGCAATCCAAAAGAAGCCTTCAAAAACAATATCCGTGGAACTTACAAT GTTGCTAAGGCTGTTGATGAAGCTAAAGTGTCTAAGATGGTTATGATTTCGACAGATAAGGCAGTTAATCCACCAAATGT TATGGGAGCAACCAAGCGCGTGGCGGAGTTGATTGTCACTGGCTTTAACCAACGTAGCCAATCAACCTACTGTGCAGTTC GTTTTGGGAATGTTCTTGGTAGCCGTGGTAGTGTCATTCCAGTCTTTGAACGTCAGATTGCTGAAGGTGGGCCTGTAACG GTGACAGACTTCCGCATGACCCGTTACTTTATGACCATTCCAGAAGCTAGCCGTCTGGTTATCCATGCTGGTGCTTATGC CAAAGATGGGGAAGTCTTTATCCTTGATATGGGCAAACCAGTCAAGATTTATGACTTGGCCAAGAAGATGGTGCTTCTAA GTGGCCACACTGAAAGTGAAATTCCAATCGTTGAAGTTGGAATCCGCCCAGGTGAAAAACTCTACGAAGAACTCTTGGTA TCAACCGAACTCGTTGACAATCAAGTTATGGATAAGATTTTCGTTGGTAAGGTTAATGTCATGCCTTTAGAATCCATCAA TCAAAAGATTGGAGAGTTCCGCACTCTCAGTGGAGATGAATTGAAGCAAGCTATTATCGCCTTTGCTAATCAAACAACCC ACATTGAATAA Protein sequence : MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTSLTFLFYQLMIGFWGLNASIS RYSKITDFMKIFFGATASSILSYSICYAFLPLFSIRFIILFILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGA GDGGALFMDSYQHPTSELELVGILDKDAKKKGQRLGGIPVLGSYDNLSELAKRHQIERVIVAIPSLDPLEYERILQMCNK LGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQVSRFNPERI VLLGHGENSIYLVYHELIREIQGIDYVPVIADIQDYDRLLQVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYN VAKAVDEAKVSKMVMISTDKAVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVT VTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRPGEKLYEELLV STELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFANQTTHIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-98 | 54 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 7e-100 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SP70585_0166 | YP_002739477.1 | CapD protein, required for the biosynthesis of type 1 capsular polysaccharide | VFG1300 | Protein | 3e-95 | 51 |
