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Name : SP70585_1081 (SP70585_1081) Accession : - Strain : Streptococcus pneumoniae 70585 Genome accession: NC_012468 Putative virulence/resistance : Virulence Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 991404 - 993729 bp Length : 2326 bp Strand : + Note : type IV secretory pathway, VirB4 component, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error DNA sequence : GTGAAAAAATTAAACCACTTAATGAAACAAAAGACCTCTTCTAATGACAATAAGCAAAAGACGAAAACACAGAAGCAGGA GATCAGACCTTCTACCCTAAATACGTTAGCCTATCAAGGTCTCTTTCAAAATGGACTCATGCAGGTCAGCCCAAGCCATT TTTCACAAACCTATCTCTTAGGAGATGTCAATTACCAAACAGTTGGCTTAGACGATAAGGGAGCTATTGTGGAGAAATAT TCTGATTTAATCAATTCACTGGACGATAAGACCAATTTCCAACTGACTATTTTCAATCAAAAAGTCAATCTGGAAAAATT TCGTAAGAGTATTCTCTATCCCTTACAGGAAGATGGGTTTGATGGCTACCGTGATGAATTGAATCGCATGATGGATGCCA ACTTAGAAGCGGGTGAGAATAACTTTTCAGCTGTCAAGTTGCTTTCATTTGGCAAGAGCGACCAAACACCAAAACTAGCT TTTCGTTCCCTGTCACAGATTGGGGAATATTTCAAGAGTGGCTTTTCAGAGATTGATGTATCTCTTGGTTTACTTGATGG AGAGGAGCGAGTGAATGTCCTTGCGGATATGTTACGAGGTGAAAATCATTTACCATTCTCTTACAAGGATTTAACCCTGT CAGGTCAATCCACCAAACACTTTATTGCGCCAACCTACCTTTCCTTTAAACACAAGAATCATATTGAATTGGACGATAGA TTATTACAGATTGTCTATGTTCGTGATTACGGTATGGAGCTAGGGGATAGATTTGGAAGTGATGATTAGCCTACACGCCA AAGGCTCAACTAAGTCTGAAGCTATGACTAAGTTACGAACCAAGAAAACCTTGATGGAATCGCAAAAGATTGGGGAACAA CAAAAGATGGCTCGGACTGGCATCTATTTGGAGAAGGTCGGCCATGTTCTTGAAAACAATATCGATGAAGCAGAAGCTCT TCTTCAAACCATGACCCAAACAGGAGATAAACTGTTTGACACCGTATTTCTAATTGGCGTGCTGGCGGATACTGAAGACC AACTCAAACAAGCCCTTGATATTATCAAGCAAGTGGCGGGGTCAAATGATATGATTATTGACAACTTGACCTACATGCAA GAAGCTGCTTTTAATAGTCTCTTGCCATTTGGGAAGAACTATCTCGAAGGAGTTTCTCGTTCTCTATTGACTTCAAACAT TGCCGTGAATGCACCTTGGACTTCCGTTGATATTCAGGACAAGGGTGGGAAATTTTATGGCATCAATCAAATCTCAAGTA ATATCATCAGTATTGACCGTGGCAAGTTAAATACTCCGTCAGGTTTGATTTTAGGGACTTCTGGAGCTGGAAAAGGGATG GCGACAAAACATGAAATCATCTCTACTAAGCTCAAGGAAGCAGATAGCGATACCGAAATTATTATTGTTGACCCAGAAAA TGAGTACAGCATTATCGGTCAAGCCTTTGGTGGAGAAAGTATTGATATTGCACCAGATTCCACTACCTTCTTAAATGTTT TAGAACTATCCGATGAGAATATGGATGAGGATCCAGTCAAGGTTAAATCCGAATTCCTCTTGTCTTGGATTGGAAAGCTC TTGGACCGCAAAATGGATGGTCGCGAAAAGTCGCTGATTGACCGTGTGACACGACTTACCTATAAGCATTTTGATACACC ATCTTTGGTCGAATGGGTCTTTGTCTTATCTCAACAACCTGAACAGGAAGCTAAGAACTTGGCACTGTATATGGAACTCT ATGTGGAAGGATCGCTAGATATTTTCTCGCATCGGACCAATATCAAGACAGATAGTCATTTTCTGATTTACAATGTCAAA AAGCTAGGCGATGAATTAAAACAAATTGCCCTCATGGTTATCTTTGACCAGATTTGGAATCGTGTGGTGAAAAACCAAAA ACTAGGGAAGAAGACCTGGATTTACTTTGATGAAATGCAGCTTCTCTTATTGGACAAATATGCCTCTGATTTCTTCTTTA AACTCTGGAGTCGTGTCCGTAAGTATGGGGCGATACCAACTGGCATTACTCAGAATGTGGAGACACTTCTTTTGGATGCC AATGGCAGACGTATTATTGCCAATAGCGAGTTCATGATTCTATTAAAACAGGCTAAGAGCGATCGCGAAGAGTTGGTGCA TTTGCTTGGACTTTCCAAGGAACTAGAGAAATACTTGGTCAATCCTGAAAAAGGTGCTGGCCTAATCAAGGCCGGTTCCA CCGTTGTCCCGTTTAAGAATAAGATTCCACAACACACCAAGCTCTTTGACATCATGAGTACAGACCCTGAAAAAATGAGG ACATGA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU98_0982 | YP_001200540.1 | Type IV secretory pathway, VirB4 component | Virulence | 89K | DNA | 0.0 | 94.4 |
| SSU05_0969 | YP_001198335.1 | Type IV secretory pathway, VirB4 component | Virulence | 89K | DNA | 0.0 | 94.1 |
