|
Name : SP70585_1077 (SP70585_1077) Accession : YP_002740339.1 Strain : Streptococcus pneumoniae 70585 Genome accession: NC_012468 Putative virulence/resistance : Virulence Product : TraG/TraD family protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 988118 - 989899 bp Length : 1782 bp Strand : + Note : identified by match to protein family HMM PF02534 DNA sequence : TTGGGACTTGCCTTTGGTTATTTCTGTCACCGCCTAACCCTACTCTATGATAGTTTAACCAATGCACCACCTATGGAACG TTTTGCCTACCTCTTAGGAGAGGGGTTAAATCAGGTTTTCAATCCTTTATGGCTATTTAGCTTTACTCGAAAATCCCTTC TTGCCTTTATCCTTGGAGTTATAACGATGTCGCTAGTCTATCTTTATGTATCGACAGGACAGAAGGTCTATCGAGAAGGG GAAGAATACGGTTCTGCACGCTTTGGAACCAGTAAGGAAAAGCGATTCTTTTACAGTAAGAATCCTTTCAATGACACGAT TTTGACTCGTGATGTTCGTCTAACCTTGTTGGAAAAGAAGAAACCCCAGTTTGACCGAAATAAAAATCTAATTGTCATTG GGGGTTCTGGTGCAGGAAAGACCTTTCGCTTTGTGAAGCCTAACCTTATCCAACTTAACTGTTCCAATATTGTGGTAGAT CCTAAGGACCATTTGGCTGAAAAAACAGGCAAGCTCTTTTTAGAAAACGGTTATCAAGTCAAGGTTTTAGACTTGGTTAA TATGACCAATTCAGATGGTTTTAATCCCTTTCGCTATGTAGAAACTGAAAATGATTTGAACCGCATGTTAACGGTCTATT TTAATAATACCAAAGGAAATGGTTCTCGCAGTGATCCCTTTTGGGATGAGGCTTCTATGACCTTGGTGCGAGCTATTGCC TCTTATTTGGTGGATTTTTACAATCCTCCAGGAAGTTCCAAGCAAGAGCAGGAAGCAAGACGTAAGCGTGGCCGTTATCC AGCCTTTTCTGAGATTGGGAAACTCATCAAACTCTTATCAAAGGGAGACAATCAGGACAAAAGTGTCCTTGAAGTCTTGT TTGAAGACTATGCTAAGAAATATGGCCACGAAAACTTTACCATGCGAAATTGGGCGGATTTCCAAAACTATAAGGATAAG ACGTTGGATTCGGTGATTGCGGTTACAACAGCTAAATTTGCCCTTTTTAATATCCAATCAGTGATTGATTTGACGCAAAG AGACACTATGGATTTGAAAACGTGGGGCACTCAAAAGACCATGGTCTATCTTGTAATTCCAGACAATGATACGACTTTTC GTTTCCTATCTGCTTTATTTTTCTCTACGGTTTTCTCTACTTTGACCAGACAGGCTGATGTGGACTTTAAAGGGCAATTG CCGATTCATGTTCGAAGCTATCTGGATGAGTTTGCGAATGTCGGAGAAATTCCAGACTTTGCTGAACAAACCTCAACAGT TCGCTCTAGGAATATGAGTCTAGTACCAATCTTGCAAAATATTGCCCAACTCCAAGGACTGTATAAGGAAAAAGAGGCTT GGAAAACCATATTAGGGAACTGCGACAGTCTCTTATATTTGGGTGGGAATGATGAGGAAACCTTTAAGTTCATGAGTGGA CTTCTAGGCAAACAAACTATCGATGTCAGAAGTACCAGTCGTTCATTTGGTCAGACGGGCTCAAGTTCCACCTCTCACCA GAAAATTGCCCGTGACTTAATGACGGCAGATGAAGTAGGGAATATGAAACGAGATGAATGCCTCGTACGAATTGCAGGAG TGCTTGTCTTTCGAACCAAGAAATATTTTCCGCTCAAACATAAGAATTGGAAATGGCTTGCAGATAAGGAATCTGATGAA CGCTGGTGGCACTACCACATCAATCCCCTAATCACTGAGGAAGAGATAGATTTGTCAGGCCATACAATAAGGGATTTAAG CACAGAAATGTCAATATATTAA Protein sequence : MGLAFGYFCHRLTLLYDSLTNAPPMERFAYLLGEGLNQVFNPLWLFSFTRKSLLAFILGVITMSLVYLYVSTGQKVYREG EEYGSARFGTSKEKRFFYSKNPFNDTILTRDVRLTLLEKKKPQFDRNKNLIVIGGSGAGKTFRFVKPNLIQLNCSNIVVD PKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRMLTVYFNNTKGNGSRSDPFWDEASMTLVRAIA SYLVDFYNPPGSSKQEQEARRKRGRYPAFSEIGKLIKLLSKGDNQDKSVLEVLFEDYAKKYGHENFTMRNWADFQNYKDK TLDSVIAVTTAKFALFNIQSVIDLTQRDTMDLKTWGTQKTMVYLVIPDNDTTFRFLSALFFSTVFSTLTRQADVDFKGQL PIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLLYLGGNDEETFKFMSG LLGKQTIDVRSTSRSFGQTGSSSTSHQKIARDLMTADEVGNMKRDECLVRIAGVLVFRTKKYFPLKHKNWKWLADKESDE RWWHYHINPLITEEEIDLSGHTIRDLSTEMSIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0973 | YP_001198339.1 | Type IV secretory pathway, VirD4 component | Virulence | 89K | Protein | 0.0 | 97 |
| SSU98_0987 | YP_001200545.1 | Type IV secretory pathway, VirD4 component | Virulence | 89K | Protein | 0.0 | 97 |
| traG | YP_006309931.1 | TraG/TraD family protein | Not tested | FWisland_1 | Protein | 0.0 | 76 |
