Gene Information

Name : SPP_1646 (SPP_1646)
Accession : YP_002738755.1
Strain : Streptococcus pneumoniae P1031
Genome accession: NC_012467
Putative virulence/resistance : Resistance
Product : CadD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4300
EC number : -
Position : 1520614 - 1521228 bp
Length : 615 bp
Strand : -
Note : identified by match to protein family HMM PF03596; match to protein family HMM TIGR00779

DNA sequence : 
ATGGGACAGACAATCATATCTGCTATTGGTGTTTATATTTCCACCAGTATCGATTATTTAATTATTTTAATTATTTTATT
TGCACAACTATCACAGAATAAACAGAAATGGCATATTTATGCGGGGCAATATCTAGGCACAGGCTTACTTGTAGGGGCGA
GTTTAGTTGCTGCTTATGTCGTTAATTTCGTGCCTGAAGAATGGATGGTTGGATTGCTTGGTTTAATCCCTATCTATTTA
GGGATTCGCTTTGCAATTCTTGGAGAAGATGCGGAAGAAGAAGAGGAAGAAATTATTGAAAGATTGGAACAAAGCAAGGC
AAATCAACTGTTTTGGACAGTTACATTGCTGACAATTGCGTCTGGCGGAGATAATTTAGGTATCTATATACCTTATTTTG
CTTCGTTAGATTGGTCACAGACCCTCGTGGCCTTGCTTGTGTTTGTAATCGGCATAATTATCTTTTGCGAGATTAGTCGG
GTGTTATCCTCTATTCCGTTAATATTCGAGACAATTGAAAAATACGAGCGAATCATTGTGCCCTTAGTATTCATTCTACT
TGGACTATACATCATGTATGAAAATGGCACGATAGAGACTTTTCTGATCGTGTAG

Protein sequence : 
MGQTIISAIGVYISTSIDYLIILIILFAQLSQNKQKWHIYAGQYLGTGLLVGASLVAAYVVNFVPEEWMVGLLGLIPIYL
GIRFAILGEDAEEEEEEIIERLEQSKANQLFWTVTLLTIASGGDNLGIYIPYFASLDWSQTLVALLVFVIGIIIFCEISR
VLSSIPLIFETIEKYERIIVPLVFILLGLYIMYENGTIETFLIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47611.1 DS RF Not tested Type-III SCCmec Protein 2e-28 48
unnamed BAC57486.1 hypothetical protein DSRF Not tested Type-IIIinv SCCmec Protein 2e-28 48
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 2e-23 45
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 3e-22 44
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 4e-17 44
SE0078 NP_763633.1 cadmium resistance transporter Not tested SCCpbp4 Protein 3e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPP_1646 YP_002738755.1 CadD BAC0057 Protein 2e-23 44