Gene Information

Name : SPP_1049 (SPP_1049)
Accession : -
Strain : Streptococcus pneumoniae P1031
Genome accession: NC_012467
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 961263 - 963000 bp
Length : 1738 bp
Strand : +
Note : neopullulanase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02903

DNA sequence :
ATGGAATTGAGTGCTATTTACCATAGGCCTGAGTCGGAGTATGCCTATCTTTATAAGGATAAGAAACTCCATATTCGAAT
TCGAACTAAGAAAGGGGACATTGAAAGCATCAACTTGCACTATGGGGACCCTTTTATCTTTATGGAGGAGTTTTATCAGG
ATACAAAAGAAATGGTCAAGATAACTTCTGGTACCTTATTTGACCATTGGCAGGTTGAAGTGTCAGTTGACTTTGCACGT
ATCCAGTATCTCTTTGAGCTCAGAGATACAGAAGGTCAAAATATTTTGTATGGCGATAAAGGGTGTGTGGAAAATTCTCT
AGAAAATCTTCATGCAATTGGGAATGGATTTAAGTTGCCTTATCTTCAAGATTGATGCCTGCAAGGTTCCTGACTGGGTT
TCAAATACGGTATGGTATCAGATATTTCCTGAAAGATTTGCCAATGGCAATGCTCTATTAAACCCAGAAGGGACTTTAGA
CTGGGATTCATCTGTCACACCTAAGAGCGATGATTTCTTTGGTGGTGATTTACAGGGGATTATTGATCATATGGATTACT
TGCAAGACTTGGGTATTACTGGACTATATCTTTGTCCCATCTTTGAATCTACAAGCAATCACAAGTACAATACGACAGAT
TACTTTGAAATTGACCGTCATTTTGGAGACAAGGAGACCTTTCGGGAACTGGTGGATCAAGCGCATCATCGTGGCATGAA
AGTCATGCTGGATGCGGTATTTAATCATATTGGTTCGCAATCTCTTCAATGGAAAAATGTCGTCAAAAATGGTGAACAGT
CTGCTTATAAGGATTGGTTCCATATTCAACAATTCCCAGTGACAACTGAAAAACTAGTTAATAAGAGAGACTTACCCTAT
CATGTTTTTGGTTTCGAGGACTATATGCCTAAGCTAAATACAGCCAATCCAGAGGTCAAGAATTATCTTTTAAAGGTTGC
GACTTATTGGATTGAAGAGTTTAATATCGATGCTTGGCGTTTGGATGTGGCTAATGAGATTGACCATCAGTTCTGGAAGG
ATTTTCGTAAGGCAGTTTTAGCTAAAAATCCTGATCTTTATATCCTAGGAGAAGTCTGGCATACATCTCAGCCTTGGCTA
AATGGAGATGAGTTCCATGCCATCATGAATTATCCTTTATCTGATAGTATCAAGGACTATTTCTTACGAGGAATTAAGAA
GACAGACCAGTTCATCGATGAAATCAATGGAGAGTCTATGTATTACAAGCAGCAGATTTCAGAGGTCATGTTTAATCTCT
TGGATTCACATGATACAGAGCGAATCCTGTGGACGGCCAATGAAGATGTTCAACTGGTTAAATCAGCCTTAGCCTTTCTC
TTTTTACAAAAAGGAACACCGTGCATTTATTACGGAACCGAGCTAGCCTTGACTGGAGGACCAGATCCAGATTGTCGTCG
TTGTATGCCTTGGGAACGTGTATCAAGTGACAATGATATGCTGAACTTTATGAAGAGGCTGATTAAGATTCGGAAATACG
CGTCAGTAATTATTTCGCATGGCAAGTATAGCCTTCAAGAAATCAAATCTGATTTAGTAGCTCTGGAATGGAAATACGAA
GGACGGATCCTCAAAGCAATATTCAACCAATCAACAGAAGATTATCTTTTAGAGAAAGAAGCAGTAGCACTAGCAAGCAA
TTGCCAAGAATTGGAGAATCAGCTTGTCATCTCTCCAGATGGATTTGTGATTTTCTAA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09660 YP_002510949.1 alpha-amylase Not tested PPI-1 DNA 0.0 99.5
SP_1046 - - Not tested PPI-1 DNA 0.0 99.4