Gene Information

Name : SPJ_0056 (SPJ_0056)
Accession : YP_002735172.1
Strain : Streptococcus pneumoniae JJA
Genome accession: NC_012466
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : 2.7.7.7
Position : 37758 - 40391 bp
Length : 2634 bp
Strand : +
Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair

DNA sequence :
ATGGATAAGAAAAAATTATTATTGATTGATGGGTCTTCTGTAGCTTTTCGGGCGTTTTTTGCGCTGTATCAGCAGTTGGA
CCGTTTTAAGAATGCGGCTGGTTTGCATACCAATGCGATTTATGGTTTTCAGTTGATGTTGAGTCATTTGTTGGAGCGGG
TTGAGCCGAGTCATATTTTGGTGGCTTTTGATGCGGGAAAGACGACCTTCCGGACAGAGATGTATGCGGACTATAAGGGT
GGTCGGGCCAAGACTCCTGATGAGTTTCGTGAGCAATTTCCTTTCATTCGTGAGTTGCTGGATCATATGGGGATTCGTCA
CTATGAGCTGGCTCAGTATGAGGCGGATGACATCATTGGGACGCTGGATAAGCTAGCAGAGCAGGATGGTTTTGATATTA
CCATTGTCAGTGGGGACAAGGATTTGATTCAGCTGACGGATGAGCATACGGTGGTTGAAATTTCCAAGAAAGGTGTGGCT
GAGTTTGAGGCCTTTACGCCAGATTACCTCATGGAAGAAATGGGCCTCACACCAGCTCAGTTTATCGATCTCAAGGCGCT
CATGGGTGATAAGTCGGATAATATCCCTGGGGTGACCAAAGTCGGTGAAAAGACGGGTATTAAGCTCTTGCTGGAGTATG
GTTCGCTTGAGGGGATTTATGAAAATATTGATGGAATGAAGACTTCTAAGATGAAGGAAAATCTCATCAATGACAAGGAA
CAGGCCTTTTTGTCTAAAACACTAGCGACCATTGATACCAAGGCACCGATTGCGATTGGTTTAGAGGACTTGGTCTATAG
TGGTCCAGATGTTGAAAATCTTGGGAAATTTTACGATGAGATGGGATTCAAACAGCTCAAGCAGGCTTTAAATGTGTCGT
CAGCTGATGTGGCTAAGGGTTTGGATTTTACTATTGTTGACCAAATCAGTCAAGATATGCTGAGTGAAGAGTCTATCTTC
CACTTTGAGCTTTTTGGTGAGAATTACCATACGGATAATTTGGTTGGATTTGCCTGGTCTTGTGAGGATAAGCTCTATGC
CACAGACAAGCTTGAGCTGTTGCAAGACCCGATTTTCAAGGATTTCTTAGAAAAAACATCTCTGAGAGTTTATGACTTTA
AGAAGGTTAAAGTTCTTTTGCAACGTTTTGGTGTGGATTTGCAGGCGCCTGCTTTTGACATCCGTTTGGCTAAATACCTC
CTTTCGACTGTGGAGGACAATGAAATTGCGACCATCGCTAGTCTTTATGGTCAGACTTACTTGGTTGATGATGAAACTTT
CTACGGTAAGGGTGTTAAAAAGGCCATTCCTGAACGTGAGAAATTCTTGGAACACTTAGCTTGTAAACTTGCTGTTTTGG
TAGAAACAGAGCCTATTTTACTTGAAAAACTCAGCGAAAATGGGCAATTAGAGCTTCTTTATGATATGGAGCAACCTCTG
GCTTTTGTTCTTGCCAAGATGGAAATTGCTGGGATTGTGGTCAAGAAAGAGACCTTGCTTGAGATGCAGGCTGAAAATGA
GCTTGTCATTGAAAAACTGACTCAAGAGATTTACGAGCTGGCTGGTGAGGAGTTTAATGTCAACTCGCCTAAGCAGTTGG
GCGTGCTTCTCTTTGAGAAATTGGGACTTCCTCTAGAATACACTAAGAAAACCAAGACAGGTTATTCGACAGCAGTGGAT
GTGTTGGAGCGTCTCGCTCCTATTGCTCCGATTGTTAAGAAAATCCTGGATTACCGTCAAATTGCTAAGATTCAATCTAC
TTATGTAATTGGCTTGCAGGACTGGATTTTGGCTGATGGAAAGATTCATACTCGCTATATGCAGGATTTGACCCAGACCG
GGCGTTTGTCTAGTGTGGATCCAAACTTGCAAAATATTCCTGCCCGATTGGAACAAGGGCGCTTGATTCGGAAGGCTTTT
GTGCCAGAGTGGGAGGATAGTGTGCTACTCAGCTCTGACTATTCACAGATTGAATTGCGCGTTTTGGCGCATATTTCTAA
GGATGAGCACTTGATTAAGGCCTTCCAAGAGGGGGCAGATATCCATACTTCGACAGCCATGCGGGTCTTTGGCATTGAGC
GTCCTGATAATGTGACTGCAAATGACCGTCGCAATGCCAAGGCAGTTAACTTTGGAGTGGTTTATGGGATTTCAGACTTT
GGCTTGTCTAATAATTTGGGAATTAGTCGTAAGGAAGCCAAAGCCTACATTGATACCTACTTTGAACGTTTTCCAGATAT
TAAAAACTACATGGATGAAGTGGTGCGGGAGGCGCGTGATAAGGGCTATGTAGAGACCCTCTTTAAGCGTCGCCGTGAGT
TGCCAGATATCAATTCGCGCAACTTCAATATTCGTGGTTTTGCGGAGCGAACTGCTATCAACTCACCTATCCAGGGTTCG
GCAGCAGATATTCTCAAGATTGCCATGATTCAGCTGGATAAAGCCTTGGTTGCAGGTGGTTATCAGACTAAGATGCTGTT
ACAAGTGCACGATGAAATCGTCCTTGAAGTGCCTAAATCTGAATTGGTAGAGATGAAAAAATTGGTGAAACAAACCATGG
AAGAAGCCATTCAACTCAGTGTTCCTCTTATCGCAGATGAGAATGAAGGGGCAACCTGGTACGAGGCTAAATAA

Protein sequence :
MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHILVAFDAGKTTFRTEMYADYKG
GRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIGTLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVA
EFEAFTPDYLMEEMGLTPAQFIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEYGSLEGIYENIDGMKTSKMKENLINDKE
QAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQALNVSSADVAKGLDFTIVDQISQDMLSEESIF
HFELFGENYHTDNLVGFAWSCEDKLYATDKLELLQDPIFKDFLEKTSLRVYDFKKVKVLLQRFGVDLQAPAFDIRLAKYL
LSTVEDNEIATIASLYGQTYLVDDETFYGKGVKKAIPEREKFLEHLACKLAVLVETEPILLEKLSENGQLELLYDMEQPL
AFVLAKMEIAGIVVKKETLLEMQAENELVIEKLTQEIYELAGEEFNVNSPKQLGVLLFEKLGLPLEYTKKTKTGYSTAVD
VLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILADGKIHTRYMQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAF
VPEWEDSVLLSSDYSQIELRVLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDNVTANDRRNAKAVNFGVVYGISDF
GLSNNLGISRKEAKAYIDTYFERFPDIKNYMDEVVREARDKGYVETLFKRRRELPDINSRNFNIRGFAERTAINSPIQGS
AADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKSELVEMKKLVKQTMEEAIQLSVPLIADENEGATWYEAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 72