|
Name : SPJ_0380 (SPJ_0380) Accession : YP_002735480.1 Strain : Streptococcus pneumoniae JJA Genome accession: NC_012466 Putative virulence/resistance : Unknown Product : integrase core domain, putative Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 364507 - 364995 bp Length : 489 bp Strand : - Note : identified by match to protein family HMM PF00665 DNA sequence : ATGGAAAAGTGCTACACAGATGTGACAGAATTTGCCATTCCAGCAAGTACTCAAAAGCTTTACTTATCACCAGTTTTAGA TGGCTTTAATAGCGAAATTATCGCCTATAATCTTTCAACTTCACCCAACTTAGAACAAGTACAAACAATGTTGGAACAGG CATTCACAGAGAAGCACTACGAGAATACGATTCTCCATAGTGACCAAGGCTGGCAATACCAACACGATTCTTATCATCGG TTCCTAGAGAGTAAGGGAATTCAAGCATCCATGTCACGTAAGGGAAACAGCCCAGACAATAGTATGATGGAGTCCTTCTT TGGGATTCTGAAATCGGAAATGTTTTACGGTTATGAGAAGTCGTTTCAGTCGCTTAAGCAATTGGAACAAGCCATTATAG ACTATATTGATTACTACAACAATAAACGAATTAAGGTAAAACTAAAAGGACTTAGCCCTGTGCAATACAGAACTAAATCC TTCGGATAA Protein sequence : MEKCYTDVTEFAIPASTQKLYLSPVLDGFNSEIIAYNLSTSPNLEQVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHR FLESKGIQASMSRKGNSPDNSMMESFFGILKSEMFYGYEKSFQSLKQLEQAIIDYIDYYNNKRIKVKLKGLSPVQYRTKS FG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0101 | NP_763656.1 | transposase | Not tested | SCCpbp4 | Protein | 1e-17 | 42 |
| tnp | NP_370590.1 | transposase | Not tested | Type-II SCCmec | Protein | 3e-11 | 41 |
| SA0062 | NP_373302.1 | transposase | Not tested | Type-II SCCmec | Protein | 3e-11 | 41 |
| CDC7B_2064 | YP_005163505.1 | transposase-like protein | Not tested | Not named | Protein | 4e-23 | 41 |
