Gene Information

Name : SPJ_1842 (SPJ_1842)
Accession : YP_002736860.1
Strain : Streptococcus pneumoniae JJA
Genome accession: NC_012466
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1744925 - 1745302 bp
Length : 378 bp
Strand : -
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence : 
TTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGCGCGAGCAACTATCGCTGT
CAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTATGGGGCAGACTAGCAGAAA
CTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGTCGCTTTGAGAAAAATGGT
CAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCAACGTGCTATGCGTGAAAA
TAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Protein sequence : 
MIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTRRFEKNG
QMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 9e-18 49
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-21 48
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-21 48
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-16 47
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 9e-18 47
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-17 45
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 3e-17 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 2e-19 44
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 2e-19 44
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-16 42