Gene Information

Name : SPJ_1520 (SPJ_1520)
Accession : YP_002736567.1
Strain : Streptococcus pneumoniae JJA
Genome accession: NC_012466
Putative virulence/resistance : Resistance
Product : CadD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4300
EC number : -
Position : 1441221 - 1441835 bp
Length : 615 bp
Strand : -
Note : identified by match to protein family HMM PF03596; match to protein family HMM TIGR00779

DNA sequence : 
ATGGGACAGACAATCATATCTGCTATTGGTGTTTATATTTCCACCAGTATCGATTATTTAATTATTTTAATTATTTTATT
TGCACAGCTATCACAGAATAAACAGAAATGGCATATTTATGCGGGGCAATATCTAGGCACAGGCTTACTTGTAGGGGCGA
GTTTAGTTGCTGCTTATGTCGTTAATTTCGTGCCTGAAGAATGGATGGTTGGATTGCTTGGTTTAATCCCTATCTATTTA
GGGATTCGCTTTGCAATTGTTGGAGAAGATGCGGAAGAAGAAGAGGAAGAAATTATTGAAAGATTAGAACAAAGCAAGGC
AAATCAACTGTTTTGGACAGTTACATTGCTGACAATTGCGTCTGGCGGAGATAATTTAGGTATCTATATACCTTATTTTG
CTTCGTTAGATTGGTCACAGACCCTCGTGGCCTTGCTTGTGTTTGTAATCGGCATAATTATCTTTTGCGAGATTAGTCGG
GTGTTATCCTCTATTCCGTTAATATTCGAGACAATTGAAAAATACGAGCGAATCATTGTGCCCTTAGTATTCATTCTACT
TGGACTATACATCATGTATGAAAATGGCACGATAGAGACTTTTCTGATCGTGTAG

Protein sequence : 
MGQTIISAIGVYISTSIDYLIILIILFAQLSQNKQKWHIYAGQYLGTGLLVGASLVAAYVVNFVPEEWMVGLLGLIPIYL
GIRFAIVGEDAEEEEEEIIERLEQSKANQLFWTVTLLTIASGGDNLGIYIPYFASLDWSQTLVALLVFVIGIIIFCEISR
VLSSIPLIFETIEKYERIIVPLVFILLGLYIMYENGTIETFLIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47611.1 DS RF Not tested Type-III SCCmec Protein 2e-28 48
unnamed BAC57486.1 hypothetical protein DSRF Not tested Type-IIIinv SCCmec Protein 2e-28 48
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 2e-23 45
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 4e-22 44
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 5e-17 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPJ_1520 YP_002736567.1 CadD BAC0057 Protein 2e-23 44