|
Name : SPJ_1498 (SPJ_1498) Accession : YP_002736545.1 Strain : Streptococcus pneumoniae JJA Genome accession: NC_012466 Putative virulence/resistance : Unknown Product : integrase core domain protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1424953 - 1425786 bp Length : 834 bp Strand : - Note : identified by match to protein family HMM PF00665 DNA sequence : ATGACTGAGTTTTCGTTAGATCTTCTTCTAAAAGCCATTAAACTAGCTCGTTCGACCTACTACTATCACTTGAAACAGCT AGACAAAACAGATAAGGACCAAGAGCTTAAAGCTGAAATTCAATCCATTTTTATCGAACACAAGGGAAATTATGCTTATC GTCGAATTCATTTAGAACTAAGAAATCGTGGTTATCTGGTAAATCATAAAAGAGTTCAAGGCTTGATGAAAGTACTCAAT TTACAAGCTAAAATGCGACAGAAACGAAAATATTCTTCTCATAAAGGAGACGTTGGTAAGAAAGCAGAGAATCTCATTCA AGGCCAATTTGAAGGCTCTAAAACAATGGAACAGTGCTACACAGATGTGACTGAATTTGCCATTCCAGCAAGTACTCAAA AGCTTTACTTATCACCAGTTTTAGATGGCTTTAATAGCGAAATTATCGCCTATAATCTTTCAACTTCACCCAACTTAGAA CAAGTACAAACAATGTTGGAACAGGCATTCACAGAGAAGCACTACGAGAATACGATTCTCCATAGTGACCAAGGCTGGCA ATATCAACACGATTCTTATCATCAGTTTCTTGAGGGTAAGGGAATTCAAGCATCCATGTCACGCAAGGGAAACAGCCAAG ACAACGGTATGATGGAGTCCTTCTTTGGGATTCTGAAATCGGAAATGTTTTACGGTTATGAGAAGTCGTTTCAGTCGCTT AAGCAATTGGAACAAGCTATTGTAGACTATATTGATTACTACAACAATAAACGAATTAAGGTAAAACTAAAAGGACTTAG TCCTGTGCAATACAGAACTAAATCCTTCGGATAA Protein sequence : MTEFSLDLLLKAIKLARSTYYYHLKQLDKTDKDQELKAEIQSIFIEHKGNYAYRRIHLELRNRGYLVNHKRVQGLMKVLN LQAKMRQKRKYSSHKGDVGKKAENLIQGQFEGSKTMEQCYTDVTEFAIPASTQKLYLSPVLDGFNSEIIAYNLSTSPNLE QVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHQFLEGKGIQASMSRKGNSQDNGMMESFFGILKSEMFYGYEKSFQSL KQLEQAIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 3e-94 | 73 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 2e-94 | 73 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 4e-56 | 49 |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 5e-62 | 48 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 9e-42 | 43 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 7e-42 | 43 |
| SE0101 | NP_763656.1 | transposase | Not tested | SCCpbp4 | Protein | 1e-20 | 41 |
