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Name : SPJ_1334 (SPJ_1334) Accession : YP_002736390.1 Strain : Streptococcus pneumoniae JJA Genome accession: NC_012466 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1276933 - 1278654 bp Length : 1722 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGAAAGAGTTTTATAAAAAAAGATTTGCTCTTACAGATGGAGGAGCAAGAAATTTAAGTAAAGCAACACTGGCTTCATT TTTCGTTTATTGTATAAACATGCTTCCTGCCATATTACTTATGATTTTTGCTCAGGAAGTTTTGGAAAATATGGGCAAAA GCAATGGCTTTTATATAGTATTCTCAGTTTTGACTTTGATAGCAATGTATATTTTGCTTTCTATCGAATACGATAAATTA TATAACACAACCTATCAAGAAAGTGCAGATTTAAGAATAAGGACAGCGGAGAATTTATCAAAATTACCTCTATCTTACTT TTCTAAACATGACATTTCCGACATTTCACAAACAATCATGGCTGATATTGAAGGCATAGAGCATGCAATGAGCCACTCAA TACCAAAGGTGGGCGGCATGGTACTGTTTTTCCCATTAATATCTGTAATGATGCTAGCGAGCAATGTCAAGATGGGTTTA GCTGTAATTATTCCATCTATTTTAAGCTTTATATTTATACCTTTATCTAAAAAATATCAGGTTAATGGACAGAATAGATA TTATGATGTCTTAAGAAAAAACTCAGAAAGCTTTCAAGAAAATATCGAAATGCAAATGGAGATTAAAGCATATAATTTAT CGAAGGATATTAAAGATGACTTATATAAAAAAATGGAAGATAGTGAGAGAGTACACTTAAAGGCAGAAGTAACTACAATT TTAACTTTGTCTATATCTTCAATATTTAGCTTTATATCTCTTGCTGTTGTGATATTTGTCGGCGTAAATCTAATTATTAA TAAAGAGATAAATTCTCTCTACCTTATAGGATATTTACTAGCTGCTATGAAGATAAAAGACTCTTTAGATGCATCTAAAG AGGGCTTGATGGAAATATTTTATTTATCGCCCAAAATAGAAAGATTAAAAGAAATTCAAAATCAAGATTTACAAGAAGGC GATGACTATAGCTTAAAAAAATTTGATATTGATCTAAAAGATGTTGAGTTTGCCTACAATAAAGACGCAAAAGTTTTAAA TGGTGTAAGTTTTAAAGCTAAGCAGGGAGAGGTCACTGCTTTGGTAGGTGCAAGTGGCTGCGGTAAAACAACTATCTTGA AACTTATATCAAGACTTTATGATTATGACAAGGGACAAATCTTAATCGATGGCAAAGATATAAAAGAAATATCAACAGAA TCTCTTTTTGATAAGGTCTCTATAGTTTTCCAAGATGTGGTTCTCTTTAATCAAAGCATTATGGAAAATATTAGAATCGG AAAGCAAGATGCAAGTGACGAAGAGGTTAAAAGAGCAGCAAAACTTGCAAATTGCACAGATTTTATAGAAAAAATGGATA AAGGTTTCGATACAGTTATTGGTGAGAACGGAGCTGAGCTATCAGGAGGAGAAAGACAAAGATTATCAATAGCCAGAGCC TTCTTAAAAGATGCGCCGATATTGATCTTAGATGAGATAACAGCAAGCCTTGATGTTAACAACGAGAAAAAGATTCAAGA GTCTTTAAATAATTTAGTTAAAGATAAAACTGTTGTAATCATTTCACATAGAATGAAATCCATAGAAAATGCAGACAAGA TAGTAGTTCTTCAAAACGGAAGAGTAGAAAGCGAAGGTAAGCATGAAGAGCTTTTACAAAAATCAAAAATTTACAAAAAT TTAATAGAAAAGACAAAAATGGCAGAAGAATTTATTTATTAG Protein sequence : MKEFYKKRFALTDGGARNLSKATLASFFVYCINMLPAILLMIFAQEVLENMGKSNGFYIVFSVLTLIAMYILLSIEYDKL YNTTYQESADLRIRTAENLSKLPLSYFSKHDISDISQTIMADIEGIEHAMSHSIPKVGGMVLFFPLISVMMLASNVKMGL AVIIPSILSFIFIPLSKKYQVNGQNRYYDVLRKNSESFQENIEMQMEIKAYNLSKDIKDDLYKKMEDSERVHLKAEVTTI LTLSISSIFSFISLAVVIFVGVNLIINKEINSLYLIGYLLAAMKIKDSLDASKEGLMEIFYLSPKIERLKEIQNQDLQEG DDYSLKKFDIDLKDVEFAYNKDAKVLNGVSFKAKQGEVTALVGASGCGKTTILKLISRLYDYDKGQILIDGKDIKEISTE SLFDKVSIVFQDVVLFNQSIMENIRIGKQDASDEEVKRAAKLANCTDFIEKMDKGFDTVIGENGAELSGGERQRLSIARA FLKDAPILILDEITASLDVNNEKKIQESLNNLVKDKTVVIISHRMKSIENADKIVVLQNGRVESEGKHEELLQKSKIYKN LIEKTKMAEEFIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0584 | NP_814349.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 4e-175 | 64 |
| ef0102 | AAM75305.1 | EF0102 | Not tested | Not named | Protein | 3e-175 | 64 |
