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Name : SPJ_1333 (SPJ_1333) Accession : YP_002736389.1 Strain : Streptococcus pneumoniae JJA Genome accession: NC_012466 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1275195 - 1276949 bp Length : 1755 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGAAGATTTACAAAAAACTATTTGCTTATGTCCAAGATAAGAAATATCTTGGGGTTTTGGCCATAATTTTTTCTGCTAT ATCTGCTCTACTTACAGTATATGGATATTATTTAATCTACAAATTTCTAGATAAGTTAATAATTAATTCAAACTTATCCG GTGCAGAGAGTATAGCATTAAAATCTGTTATTACACTAACAAGTGGAGCGATATTTTATTTTGTCTCAGGAATGTTTTCA CATATCTTGGGATTTAGGCTTGAAACAAATTTAAGAAAAAGGGGAATCGATGGTCTGGAAAAAGCAAGTTTTAGGTTCTT TGACTTAAATCCATCTGGTCAAATAAGAAAGATCATAGATGATAATGCAGCACAAACTCATCAGGTGGTAGCACACATGA TTCCCGATAGTTCTCAGGCAATAATCACACCCGTACTTGTACTTGCACTTGGCTTTATAGTAAGTATAAGGGTTGGCATA ATTTTGCTTGCTCTTACTATAATTGGTGGCTTAATTTTAGGGGCAATGATGGGCGAGCAAGAATTTATGAAGATATACCA AGAATCCCTATCTAAACTAAGTGCTGAAACTGTTGAGTACGTGAGAGGAATGCAAGTTGTAAAAATATTTAAAGCAAATG TAGAGTCTTTTAAAAGCTTTTATAAGGCGATAAAAGATTACTCAAAGTATGCTTATGATTATTCCCTATCTTGTAAAAGG CCTTATGTTTTGTATCAATGGTTATTTTTTGGACTGATTGCAATTTTAATTATTCCTATAGTTTATTTTATGACTAGCTT AGCTAGCGCAAAGGTGATTTTACTTGAGCTTATCATGATTTTATTTTTATCAGGAGTTCTCTTTGTTTCATTCATGAGAA TGATGTGGTACTCCATGTATATTTCTCAAGGAAATTATGCAGTAGATACTTTAGAGGCGCTTTACGAAGATATGCAAAAA GACAAATTAGTGCATGGTAATGTCAATAATTTTAAAAACTATAATATAGAATTTGAGAATGTTAGCTTTGCTTATAATGA TAAAGCTGTCATTGAAAATTTATCCTTTAATTTAGAAGAAGGAAAGTCCTACGCACTTGTCGGTTCATCTGGATCAGGCA AATCAACAGTAGCAAAACTTATATCAGGTTTTTACAATGTTAATAAAGGAAGCATAAAGATAGGCGGGATAGCAATAAGT GAATATTCTGACGAAGCCTTAATTAAAGCCATTTCCTTTGTTTTTCAAGATTCAAAATTATTCAAGAAGAGCATTTATGA TAATGTAGCTTTAGCTAATAAAGATGCGACGAAAGATGACGTTATGAGAGCCTTAAAATTAGCAGGATGCGATTTAATAT TAGACAAATTCCCAGAAAGAGAAAATACAATCATAGGCTCAAAAGGTGTTTATTTATCCGGTGGAGAAAAACAAAGAATT GCAATTGCTAGAGCAATTTTAAAGGATTCCAAAATTATTATTATGGATGAAGCATCAGCATCTATTGACCCAGATAACGA GTTTGAATTGCAAAAAGCTTTTAAAAATCTTATGAAGGATAAAACAGTTATCATGATTGCACACAGGCTATCTACAATTA AAGACCTTGATGAAATTATTGTCATGGATAGTGGAAAAATTATAGAAAGAGGGTCTGACAAAGAATTAATGTCAAAAGAT ACAAGGTATAAGAGCCTGCAAGAGATGTTTAACAGTGCGAATGAATGGAGGGTTTCAAATGAAAGAGTTTTATAA Protein sequence : MKIYKKLFAYVQDKKYLGVLAIIFSAISALLTVYGYYLIYKFLDKLIINSNLSGAESIALKSVITLTSGAIFYFVSGMFS HILGFRLETNLRKRGIDGLEKASFRFFDLNPSGQIRKIIDDNAAQTHQVVAHMIPDSSQAIITPVLVLALGFIVSIRVGI ILLALTIIGGLILGAMMGEQEFMKIYQESLSKLSAETVEYVRGMQVVKIFKANVESFKSFYKAIKDYSKYAYDYSLSCKR PYVLYQWLFFGLIAILIIPIVYFMTSLASAKVILLELIMILFLSGVLFVSFMRMMWYSMYISQGNYAVDTLEALYEDMQK DKLVHGNVNNFKNYNIEFENVSFAYNDKAVIENLSFNLEEGKSYALVGSSGSGKSTVAKLISGFYNVNKGSIKIGGIAIS EYSDEALIKAISFVFQDSKLFKKSIYDNVALANKDATKDDVMRALKLAGCDLILDKFPERENTIIGSKGVYLSGGEKQRI AIARAILKDSKIIIMDEASASIDPDNEFELQKAFKNLMKDKTVIMIAHRLSTIKDLDEIIVMDSGKIIERGSDKELMSKD TRYKSLQEMFNSANEWRVSNERVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0583 | NP_814348.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 2e-169 | 63 |
| ef0101 | AAM75304.1 | EF0101 | Not tested | Not named | Protein | 1e-169 | 63 |
