|
Name : SPJ_1024 (SPJ_1024) Accession : YP_002736094.1 Strain : Streptococcus pneumoniae JJA Genome accession: NC_012466 Putative virulence/resistance : Unknown Product : transposase (IS4 family) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3293 EC number : - Position : 975385 - 975774 bp Length : 390 bp Strand : + Note : identified by match to protein family HMM PF01609 DNA sequence : ATGAAGGCTCAAGCGATTGTCACAAGTCAAGGGAGAATTGTTTCTTTGGATATCACTGTGAACTATTGTCATGATATGAA GTTGTTCAAAATGAGTTGCAGAAATATCGGACAAGCTGGTAAAATCTTGGCTGACAGTGGTTATCAAGGGCTCATGAAGA TATATCCTCAAGCACAAACTCCACGTAAATCCAGCAAACTCAAGCCGCTAACAGTTGAAGATAAAGCCTGTAACCATGCG CTATCCAAGGAGAGAAGCAAGGTTGAGAACATCTTTGCCAAAGTAAAAACGTTTAAAATAATTTCAACAACCTATCGAAA TCATCGTAAACGCTTCGGATTACGAATGAATTTGAGTGCTGGTATTATCAATCATGAACTAGGATTCTAG Protein sequence : MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSCRNIGQAGKILADSGYQGLMKIYPQAQTPRKSSKLKPLTVEDKACNHA LSKERSKVENIFAKVKTFKIISTTYRNHRKRFGLRMNLSAGIINHELGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1693 | YP_003446795.1 | transposase orfB, IS1381 | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-50 | 89 |
