Gene Information

Name : BMEA_B1103 (BMEA_B1103)
Accession : YP_002734834.1
Strain :
Genome accession: NC_012442
Putative virulence/resistance : Unknown
Product : Integrase, catalytic domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1081201 - 1082082 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTTTGCGTTCATCGACACGGAGAAGGCCCATATGTCTCTGTCACGGCTGTGCGCTTTCGCAGGCGTCAGCATCAG
CGGTTATTATGCATGGAAGCATCGTTTGCCCAGTCGTCGTCAGCTTGATGACATGATTATTCTGGCCCACATTCGTAATC
AGTTTGCGCTGTCACGTGAAACCTATGGCAGCCCTCGAATGCATGTTGAACTGAACGAAGAAGGTATTCGAGCAGGTCGT
CATCGCACGGCGCGACTGATGCGTGAAAATGGTTTGAAAGCCCGACAGAAAACGCGCTTCAAACGCACGACCGACAGCAA
TCATGGTGAGCCTGTCGCTCCCAATCTTCTGGATCAGGACTTCACTTGTGACAGACCAGATCAGAAATGGGGTGTCGATA
TCAGTTACATATGGACCGCCGAAGGCTGGTTATATCTGGCAATCGTTGTCGATCTTTATTCTCGTCGCATCATTGGCTGG
GAAGCGCGCGATCGAATGAAAAAGGACCTTGCTATTTGTGCTTTGAAGAAGGCCATTGCAATTCGGTACCCAAAGCCGGG
GCTGATCCAACACTCCGACAGGGGAAGCCAATATGCCAGTTATGAGTATCGCAAAATCCTCAAATCGCACAGCATGCTTC
CATCCATGAGCGGCAAAGGAAATTGCTATGACAATGCAATGGTGGAAACCGTCTTCAAAACGATCAAGTCGGAACTGATC
TGGCGCGCTGCATTCCAGACCAGAAATGACGCAATCAAAGCCATTGGCAAATACATTGACGGCTTCTATAATCCCGTGCG
CAGACATTCTACACTGGGCTATAAATCGCCGGTGAAATTCGAGGCAATGAACCGAAACTTAGAGACAGAAGCTCTCCACT
AA

Protein sequence :
MKFAFIDTEKAHMSLSRLCAFAGVSISGYYAWKHRLPSRRQLDDMIILAHIRNQFALSRETYGSPRMHVELNEEGIRAGR
HRTARLMRENGLKARQKTRFKRTTDSNHGEPVAPNLLDQDFTCDRPDQKWGVDISYIWTAEGWLYLAIVVDLYSRRIIGW
EARDRMKKDLAICALKKAIAIRYPKPGLIQHSDRGSQYASYEYRKILKSHSMLPSMSGKGNCYDNAMVETVFKTIKSELI
WRAAFQTRNDAIKAIGKYIDGFYNPVRRHSTLGYKSPVKFEAMNRNLETEALH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 5e-67 57
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-67 57
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-67 57
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 3e-49 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-49 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-49 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 3e-49 46
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-49 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 3e-49 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-49 46
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-49 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 1e-48 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-40 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-40 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-40 41
tnpB CAB61574.1 transposase B Not tested HPI Protein 9e-33 41
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 5e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMEA_B1103 YP_002734834.1 Integrase, catalytic domain-containing protein VFG1706 Protein 9e-50 46