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Name : PERMA_0838 (PERMA_0838) Accession : YP_002730625.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Resistance Product : sodium/solute symporter family protein Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 790544 - 792142 bp Length : 1599 bp Strand : + Note : identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813 DNA sequence : ATGATAAGAGTTTTAGGTATATATCTTACAGTTCTGGCTGTTTCTTTTTCCTCTTTCGCTTCTAACGAGGCTATAGTTGG TATGAACCCTGTCGCTATCGCATTTTTCCTGTTTTTTATATCAGCAACACTTGGTATAACCTACTGGGCGGCAAAAAGAT CAAGAACAGCTACGGAGTTTTATGCTGCTGGTAGATCCGTATCAGGATTTCAGAACGGGCTAGCCCTCGCAGGTGATTAT ATGAGTGCTGCCTCTTTTTTAGGTATCGCCGGTATGGTTGCAACAAAAGGTTATGACGGTCTTATATACTCAATAGGCTT TCTTGTTGGATGGCCTGTTATAATGTTTCTTATAGCTGAACCTTTAAGAAATCTCGGTAAGTACACATTTGCAGATGTTG TTGCTTACAGGCTTCAGCTAAGACCTATAAAGATACTTGCAGCTTTGGGATCAATAGCTGTAGTTATCCTCTATCTTATA GCCCAGATGGTTGGATCAGGTAAACTTATCCAGCTCGTTTTTGGGATACCATATGAGCTTGCTGTTGTTATAATCGGTGG TCTTATGATCACTTACGTTCTCTTTGGTGGAATGCTTGCAACAACATGGGTTCAGATAATAAAGGCTGTTCTTCTTTTAG GTGGTGCAACAATAATGACAGTCTGGACACTTGCTAAGTTCGGTTTTTCTCCTGAAAATCTCTTCCAGAATGTTAAAGAT GTGGCAGGAGAAAAATGGCTTCAGCCTGGTGGACTTGTTTCAGACCCGATAGATGCTGTTTCTCTGGGACTTGCTCTAAT GTTTGGTACAGCAGGACTTCCACATATTCTTATGAGATTTTACACAGTTCCTGATGCTAAGGAGGCAAGGAAGTCTGTTT TCTACGCAACAGGGTTTATTGGATATTTCTACATACTAACATTTGTTATAGGTTTTGGTGCTGTTGTTCTTGTAGGTCTT GATAAAATACTCTCAGTTGGTAAAGGTGGAAATATGGCCGCTCCACTTCTTGCCCAGGCTTTAGGTGGTGATGCATTTTT AGGATTTATAGCTGCTGTTGCCTTTGCAACAATACTCGCTGTTGTTGCAGGACTGACTCTCGCTGGAGCAAGTGCGTTAT CACACGATCTCTATGTAGGTGTTATAAGGAAAGGTGAATCATCTGAGGAGCAGGAGGTTAAGATAACAAGAATAGCTGTT TTTATACTGGGAATTATAGCCATAATCCTTGGAATTGCATTTGAAAATCAGAATATCGCCTTTATGGTTGGTCTTGCTTT TGCTATAGCAGCGTCAACAAACTTCCCGGCTCTATTCCTGTCTATAGTCTGGAAAAAGTTTACCACAGCAGGAGCTGTTG CAAGTATGGCAACAGGACTTGTTCTCTCAGTTGTTCTTATTATTCTAAGTAAAACTGTATGGGTTGCTATCCTCGGAAAT CCAGAACCTGTATTCCCGTACAAAAATCCTGCTATTATCTCTATGACAGCGGCTTTCGCAGTTGGGATAATAGTCTCTCT GATGACAAAGGAAAGGGAAGCTGAAGAGAAGTTTGAAGAGATGAAGGTAAGGAAGTATCTTGGTATTGGTGCTGAATAA Protein sequence : MIRVLGIYLTVLAVSFSSFASNEAIVGMNPVAIAFFLFFISATLGITYWAAKRSRTATEFYAAGRSVSGFQNGLALAGDY MSAASFLGIAGMVATKGYDGLIYSIGFLVGWPVIMFLIAEPLRNLGKYTFADVVAYRLQLRPIKILAALGSIAVVILYLI AQMVGSGKLIQLVFGIPYELAVVIIGGLMITYVLFGGMLATTWVQIIKAVLLLGGATIMTVWTLAKFGFSPENLFQNVKD VAGEKWLQPGGLVSDPIDAVSLGLALMFGTAGLPHILMRFYTVPDAKEARKSVFYATGFIGYFYILTFVIGFGAVVLVGL DKILSVGKGGNMAAPLLAQALGGDAFLGFIAAVAFATILAVVAGLTLAGASALSHDLYVGVIRKGESSEEQEVKITRIAV FILGIIAIILGIAFENQNIAFMVGLAFAIAASTNFPALFLSIVWKKFTTAGAVASMATGLVLSVVLIILSKTVWVAILGN PEPVFPYKNPAIISMTAAFAVGIIVSLMTKEREAEEKFEEMKVRKYLGIGAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 8e-101 | 54 |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 8e-74 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PERMA_0838 | YP_002730625.1 | sodium/solute symporter family protein | BAC0564 | Protein | 2e-122 | 63 |
| PERMA_0838 | YP_002730625.1 | sodium/solute symporter family protein | BAC0570 | Protein | 3e-116 | 61 |
