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Name : thiC (PERMA_0795) Accession : YP_002730582.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 748621 - 749988 bp Length : 1368 bp Strand : + Note : identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190 DNA sequence : ATGGGTAAATATAAAGTCCCAAGGAGCACCACATACGGAAAAACCCAGATGGATTATGCCAGGGAAGGTATAATCACACC TGAGATGGAGTATGTTGCAAAAAGGGAAGATCTTCCTGTTGAGCTTGTCAGATCGGAGGTTGCCAGAGGGAGAATGATAA TCCCGGCTAACATACATCACTACTCACTTGAACCTATGGCTATCGGTATTGAGGCAAAATGTAAAGTTAATGCTAATATA GGAAACTCTGCTGTTGTTTCCGATGTTGAAGGTGAGCTTGAGAAGTTAAGAGTAGCTCTTAAATATGGAGCAGATACAGT TATGGATCTTTCAACAGGTGGAAATGTAAACGAGATAAGGGAGGCTATAATAAGGGAATCTCCTGTTCCTGTAGGAACAG TTCCTATATATCAGGCTCTTCAGGAGGTCAGAACTATAGAACAGCTTACAGAACAGGATATCCTTGATATTATTGAGCTT CAGGCACAGCAGGGTGTTGATTATATGACAATTCACGCAGGTGTCTTAAAGGAGTTTTTACCGCTGGTTAATCACAGATT GATGGGTATCGTTTCACGTGGCGGATCAATAATGGCTGAATGGATGACAGTTCATGGAAAACAGAATCCTCTATACACAC ATTTTGATAAGATATGTGAGATATTCAAAAAGTACGATGTAACATTCTCACTTGGAGATGGTCTCAGACCTGGCTGTATA AATGATGCTTCAGATGAGGCTCAGTTCGCAGAGCTTAAGGTTTTAGGTGAACTTACAAAGAAAGCTTGGGAACACGGTGT TCAGGTTATGATAGAAGGTCCAGGTCACGTTCCAATGGATCAGATCGAGCTTAATATAAAGAAAGAGATGGAGTTATGTC ATGAAGCTCCATTTTATGTTCTTGGACCTCTCGTTACAGATATAGCACCCGGTTATGACCATATAGCATCAGCTATAGGA GCTGCGATGGCAGGATGGTATGGGGCATCAATGCTCTGTTATGTAACACCTAAGGAACATTTAGGACTTCCAAATGCAGA GGATGTTAAGCAGGGGCTGATAGCTTATAAGATAGCAGCTCACGCAGCTGATCTTGCCAGACACAGGAAAGGTGCAAAAG AGTGGGATGATGCTATGTCAAAGGCAAGATACGAGTTTGACTGGGAGAAACAGTTTGAGCTTGCTATAGATCCTGAAACA GCAAGAAAGTACCATGATGAAACACTGCCACAGGAAGGATACAAATCAGCCAAATTCTGTTCAATGTGTGGACCTTCATT CTGTGCATACAGAATATCCCAGAATGTTCAGGAGGCTGTAAGCCAGAGTCCTGATTTTGCACAGATAGATACTAAAGAAG AAAATTAA Protein sequence : MGKYKVPRSTTYGKTQMDYAREGIITPEMEYVAKREDLPVELVRSEVARGRMIIPANIHHYSLEPMAIGIEAKCKVNANI GNSAVVSDVEGELEKLRVALKYGADTVMDLSTGGNVNEIREAIIRESPVPVGTVPIYQALQEVRTIEQLTEQDILDIIEL QAQQGVDYMTIHAGVLKEFLPLVNHRLMGIVSRGGSIMAEWMTVHGKQNPLYTHFDKICEIFKKYDVTFSLGDGLRPGCI NDASDEAQFAELKVLGELTKKAWEHGVQVMIEGPGHVPMDQIELNIKKEMELCHEAPFYVLGPLVTDIAPGYDHIASAIG AAMAGWYGASMLCYVTPKEHLGLPNAEDVKQGLIAYKIAAHAADLARHRKGAKEWDDAMSKARYEFDWEKQFELAIDPET ARKYHDETLPQEGYKSAKFCSMCGPSFCAYRISQNVQEAVSQSPDFAQIDTKEEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-133 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-133 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 7e-128 | 59 |
