Gene Information

Name : fliP (PERMA_0709)
Accession : YP_002730497.1
Strain : Persephonella marina EX-H1
Genome accession: NC_012440
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 665235 - 665903 bp
Length : 669 bp
Strand : -
Note : identified by match to protein family HMM PF00813; match to protein family HMM TIGR01103

DNA sequence : 
TTGGGACAGACTGATGCTGTGAACGATACGCTGGCACAGCTTAACAATCTCGATATAACACTCAAGATTCTCTTCCTCAT
TACTATACTCAGCCTTGCCCCTTCAATACTTATCACAGTTACAGCGTTTGTAAGGATAGTTATCGTTCTGTCTCTTTTAA
GACATGCCCTCGGTATCCCTCAGTCCCCTCCAAATCAGGTTATAATAGCTTTTTCCCTCTTCCTTACATTTTTTGTGATG
AAACCTGTTTTTGACGATATAAACGGTAATGCTATACAGCCCTATCTAAAAAAAGAGATAGGAGATATGGAAGCTATTGA
AAGGGCAAAGGAGCCTGTAAAAAAGTTTATGCTTAAAAATACAAGAAAGGAAGATCTTAAACTGTTTTTAGATATAGCTG
GAGAAAAGCCCAAATCACCTGATGAGGTAAGTATGGTCTCCCTCATACCTGCATTTATGATAAGTGAGATAAAAACGGCA
TTTGAGATCGTATTTATAATATTTCTGCCATTTCTTATAATAGATATGCTTGTTGCGAGTATACTGATGTCCATGGGTAT
GATGATGATTCCACCAATGCTCATATCTCTTCCTTTTAAGCTTATACTTTTCGTTCTTGCCGACGGTTTTGAGCTTTTAA
CAAAAGCTTTAATACAGAGTTACCAGTAG

Protein sequence : 
MGQTDAVNDTLAQLNNLDITLKILFLITILSLAPSILITVTAFVRIVIVLSLLRHALGIPQSPPNQVIIAFSLFLTFFVM
KPVFDDINGNAIQPYLKKEIGDMEAIERAKEPVKKFMLKNTRKEDLKLFLDIAGEKPKSPDEVSMVSLIPAFMISEIKTA
FEIVFIIFLPFLIIDMLVASILMSMGMMMIPPMLISLPFKLILFVLADGFELLTKALIQSYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-14 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_002730497.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-32 55
fliP YP_002730497.1 flagellar biosynthetic protein FliP VFG2494 Protein 6e-31 52
fliP YP_002730497.1 flagellar biosynthetic protein FliP VFG1259 Protein 3e-30 52
fliP YP_002730497.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-30 51