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Name : hslU (PERMA_0598) Accession : YP_002730387.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 554606 - 555952 bp Length : 1347 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : TTGCAGCTTAGAGAAGATCTAACTCCGAAGCAGATTGTTGAGGAGCTTGATAAGTATATAGTAGGTCAGAAAGAGGCTAA GAAGGCTGTTGCTATAGCTTTAAGAAATAGATGGAGAAGGCATAAACTGCCTGAAGATCTGAGGGATGAGGTTATACCAA AAAATATCCTTATGATAGGACCAACAGGTGTTGGTAAAACTGAGATAGCAAGAAGACTTGCGTCACTTGTTGGTGCTCCT TTTATAAAGGTTGAGGCTACAAAATTTACAGAGGTAGGTTATGTAGGAAGGGATGTTGAGTCTATAATAAGGGAGCTTGC GGAAGCCTCATTCAAGATGGTGAAAGCTGAAAAGATGGAGAAGGTTAGGGAGAAGGCTAAAGAGATAGCTGAGGAGAAGA TACTTGATTATCTTGTTCCTATGAGAGTTAAAAGATACGGAACACTTGAGACATTTGAGGAGGAAACATCTCCGGCCAGG GAGAAGTTCAGACAGATGTTAAGAAATGGGGAGCTTGATGAGAGAACTGTTGAGATAGATGTTGAGGAGAAAGGAGTTTC GGTTGTAGGTGGTGTTATCGCACCGGGACTTGAGGATATAGAAAACCAGCTTAAAGATCTCTTCTCAAGCCTTGCACCAA CAAAAAGGAAGAGAAGAAAGATGACAGTTAGGGAAGCTATGAGAGTTCTTGAACAGCAGGAGGCTGAAAAACTGATAGAT ATGGATGAGGTTGCATCAGAGGCTGTTTACAGGGCAGAGAACTTTGGCATAGTTTTTATAGATGAGATAGACAAGGTTGC AGGTAAATCAACAGGATCTTCACCTGATGTATCAAGGGAAGGTGTACAGAGGGATCTCCTTCCAATTGTTGAGGGAACAA CGGTATCAACAAAGTACGGTCCTGTTAAGACCGATCATATACTTTTTATAGCCGCAGGTGCGTTCCATCTCTCAAAGCCT TCAGATCTTATACCTGAGCTACAGGGAAGATTCCCGATAAGGGTTGAACTACAGCCTTTAACAAAAGATGATTTTGTCAA GATATTAACTCAGCCTAAAAATGCTCTCATAAAACAGTACAAAGCGTTAATGGCTACTGAAGGTGTTGATATAGAGTTTA CAGATGATGCTATAGAAGCAATAGCTGAGATAGCTGAGCAGGTTAATGAGAAAACTGAAAATATAGGTGCCAGAAGACTT CACACGATACTTGAAAGAATTATGGAGGACTACTCATTTGAAGCACCTGATCTTAAGGGACAGCATATAATAATTGATGA AAAGGTTATAAGATCAAAACTTGGTGATATTATCCAGAGTGAAGACCTGACTAGATATATTTTATAA Protein sequence : MQLREDLTPKQIVEELDKYIVGQKEAKKAVAIALRNRWRRHKLPEDLRDEVIPKNILMIGPTGVGKTEIARRLASLVGAP FIKVEATKFTEVGYVGRDVESIIRELAEASFKMVKAEKMEKVREKAKEIAEEKILDYLVPMRVKRYGTLETFEEETSPAR EKFRQMLRNGELDERTVEIDVEEKGVSVVGGVIAPGLEDIENQLKDLFSSLAPTKRKRRKMTVREAMRVLEQQEAEKLID MDEVASEAVYRAENFGIVFIDEIDKVAGKSTGSSPDVSREGVQRDLLPIVEGTTVSTKYGPVKTDHILFIAAGAFHLSKP SDLIPELQGRFPIRVELQPLTKDDFVKILTQPKNALIKQYKALMATEGVDIEFTDDAIEAIAEIAEQVNEKTENIGARRL HTILERIMEDYSFEAPDLKGQHIIIDEKVIRSKLGDIIQSEDLTRYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 1e-93 | 51 |
