|
Name : hemC (PERMA_0444) Accession : YP_002730234.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0181 EC number : 2.5.1.61 Position : 398301 - 399227 bp Length : 927 bp Strand : + Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis DNA sequence : TTGAGGATAAGAATAGGAACAAGAAAAAGTAAACTTGCCCTCTGGCAGGCAAATTATATTGCAGATCAGCTGAAGAAACA TTTTCCTGATCTGGAAGTTGAACTTGTAAAGATAGTTACTAAAGGTGACAAGATCCTTGATGTCCCACTTGCTAAGGTGG GAGGGAAAGGTCTTTTTGTTAAAGAGATAGAGGAAGCTATGCTCAGAAATGAGATAGATATAGCTGTTCATTCTTTAAAG GATGTTCCAACATACTTTCCTGAAGGTCTTGGGCTTGTTGCTATCACCGAGAGGGAAGATCCAAGGGATGCTTTCCTGTC TGTTAAATACAACTCCATTGAGGATATGCCTGAAGGGGCTGTTCTTGGTACGAGCTCTCTTAGAAGAAAAGCCCAGATAA TGATGAAAAGAAAAGATATCCGTATAGAAGACCTTAGAGGGAATGTTGATACGAGAATAAGAAAGCTTGAAGAAGGCCAG TATGACGGGATTATCCTCGCCTATGCAGGTCTTAAAAGACTTGGACTTGAGGGTAAGGTCAGACAGATACTCCAGCCTGA TTATATGATACCTGCTGTTGCACAGGGATTTCTTGGAATTGAGGCAAGGCTTGATGATGAAAAAACAAGGGAGATAGTAT CGGTTCTTAATCATAGAGAAAGTGAGATAAGGGCAAAAGCTGAGAGGGCATTCTTAAAAACACTTGAAGGTGGCTGTCAG GTTCCACTTGCAGGATACTCTGAGATAGTAAATGGAAAGCTGAAGATAACTGGGTTTGTTTCTGATCTTACAGGAGATAG AGTTTTCAGGGATAGTATGGAAGGAAGTCTTGAAGATGCTGAGAGTTTAGGTGTTAAGCTTGCAGAAAAACTGCTTTCAG ATGGAGCAAAGGAAGTTCTTGAAGAAATATACTCCGGATCAGAATAA Protein sequence : MRIRIGTRKSKLALWQANYIADQLKKHFPDLEVELVKIVTKGDKILDVPLAKVGGKGLFVKEIEEAMLRNEIDIAVHSLK DVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGAVLGTSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQ YDGIILAYAGLKRLGLEGKVRQILQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGCQ VPLAGYSEIVNGKLKITGFVSDLTGDRVFRDSMEGSLEDAESLGVKLAEKLLSDGAKEVLEEIYSGSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 7e-77 | 54 |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 7e-77 | 54 |
