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Name : PERMA_0337 (PERMA_0337) Accession : YP_002730130.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Virulence Product : nitrogen assimilation regulatory protein NtrX Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 306637 - 307992 bp Length : 1356 bp Strand : - Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954 DNA sequence : ATGAACGGATTTTCTATTTTAGTTGTTGATGATGAAAAGAATATAACTGACCTACTTAAAGACATTTTAGAAGATGAAGG TTTTTATGTTGAGACAGCCCAGTCTGTAAAGGAGGCAAAGGAAAGATTAAGGGAGAAAGATTTTGAGATAATATTCCTTG ATGTATGGCTTCCCGATGGTGAAGGAACGGACCTTATACCTTACATAAAGGAAGTCAACCCTATATCAAAAATAGTTATG ATATCAGGTCATGCAAACATACCTATAGCTGTAAAAGCCCTTAAAGAGGGTGCGTTTGACTTCCTTGAAAAACCGATCTC CACTGACAGTATACTTGCCGTTATTGAAAAGGCTGGTAAAGAGATAAAAAAAGAGGTGGAGTACAGATTTTTAAAAGAGA AAGAATTTGAAAGCTTCCAGATTATAGGTGAAAGCGAGCCTATCAAAAAACTGAAAAAACAGATAGAGAAGGTGGCAAAA ACAAACGCATGGGTCATGATCTTCGGTGAGAACGGAACAGGAAAGGAGCTTGTTGCAAGGTCTATACACTATCTCAGTGA AAGAGCAGATAAGCCTTTTGTTGATATAAACTGTGCTGCAATTCCTGATGATCTTTTAGAGTCTGAGCTTTTTGGGTATG AGAAAGGGGCTTTCTCAGGAGCGGTCAGCAGAAAGCTTGGAAAACTTGAGATAGCCGATGGTGGAACCCTTTTTCTTGAT GAGGTTGCTGATATGAGTCTTTCCTCACAGGCAAAACTTCTAAGGGTCCTTGAGGAGCAGGAGTTCAGCAGACTTGGGAG CAACCAGAAGATAAAGGTTGATATAAGGGTTATATCCGCAACAAACAAAAATCTGGATAGAGAGATACAGGAAGGAAGGT TCAGACAGGATCTTGCATTCAGACTTTCTGTAGTTCCCCTTTATGTTCCACCTTTGAGAGAAAGGGGTGATGATATAATC CTGCTTGCAGAGTATTTTCTTGAGAGATCCTGTAGAGAAAACAAGATGGAAAAGCCTGTTCTATCTGATGATGTAAAGGA AGCCCTCTTAAAGTACAGCTGGCCAGGTAATGTAAGGGAGCTGAAAAACCTTATGGAAAGGCTGTGCATATTCGCCTCAG ATGGCATAGTAACAGTAGATGACCTCCCTTCCTACATAGTTAAGAACAGACCTGTAAGATCAAGGTCTGAGATAGGGATA AAACCTTTAAAACAGGCAAGGGAGGAAGCTGAAAAGGAAGTTATAAAACAGGCATTAAAACAGTACGGAAGGAATCTTAA AGAGATAGCAAAGGTTCTTGAGGTTGATCTTTCCTCATTATACAGAAAGATAAAACAGTACAATCTGGAGGAGTGA Protein sequence : MNGFSILVVDDEKNITDLLKDILEDEGFYVETAQSVKEAKERLREKDFEIIFLDVWLPDGEGTDLIPYIKEVNPISKIVM ISGHANIPIAVKALKEGAFDFLEKPISTDSILAVIEKAGKEIKKEVEYRFLKEKEFESFQIIGESEPIKKLKKQIEKVAK TNAWVMIFGENGTGKELVARSIHYLSERADKPFVDINCAAIPDDLLESELFGYEKGAFSGAVSRKLGKLEIADGGTLFLD EVADMSLSSQAKLLRVLEEQEFSRLGSNQKIKVDIRVISATNKNLDREIQEGRFRQDLAFRLSVVPLYVPPLRERGDDII LLAEYFLERSCRENKMEKPVLSDDVKEALLKYSWPGNVRELKNLMERLCIFASDGIVTVDDLPSYIVKNRPVRSRSEIGI KPLKQAREEAEKEVIKQALKQYGRNLKEIAKVLEVDLSSLYRKIKQYNLEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 5e-66 | 42 |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 5e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PERMA_0337 | YP_002730130.1 | nitrogen assimilation regulatory protein NtrX | BAC0467 | Protein | 5e-73 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PERMA_0337 | YP_002730130.1 | nitrogen assimilation regulatory protein NtrX | VFG1214 | Protein | 8e-73 | 41 |
