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Name : tkt (PERMA_1704) Accession : YP_002731468.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1650573 - 1652567 bp Length : 1995 bp Strand : - Note : identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232 DNA sequence : ATGGAGAATATTGACCAGCTGTGTGTAAACACTATAAGAATACTCTCGCTGGACCAGATCCAGAAAGCGAAATCAGGACA TCCTGGAATGCCACTCGGTGCCGCTCCTATGGCTTACGTTCTGTGGGACAGGGTTTTAAAACACAACCCGAAAAATCCAA ACTGGTTTAACAGGGACAGATTTATACTTTCTGCAGGGCACGGTTCTGCAATGCTTTACTCACTGCTTCACCTTTACGGT TACGATCTTCCTCTTGATGAGCTGAAAAGGTTCAGACAGCTTGGGAGTAAAACACCTGGACATCCTGAATACGGACTTAC ACCTGGCGTAGAGGCAACAACAGGTCCTCTCGGACAGGGATTTGGTATGGGTGTAGGTATGGCTATAGCAGAGTGTTACC TTTCAAACTATTTCAACAGGGATGGCTTCAATATAGTTGATCATTACACATACGCCATTGTCTCAGATGGAGATCTTATG GAAGGTATATCCTCTGAGGCTGCAGCTCTTGCAGGAAGGCTGAAACTTGGGAAACTGATATACCTTTACGACGATAACCA TATAACAATAGAGGGAGATACGAATCTTGCATGGAATGAGGATATAGAACTTAGATTCAAAGCCCACGGATGGCATGTTA TAACTGTATCAGATGGAAATGATCTTGATGCGATATACGGGGCTATAAAGGCTGCGCAGGATGAGAAGGAGAGACCTTCA CTTATAAAGATAAGAACACATATAGGTTATGGATCTCCAAAACAGGACGATCCTGAGGTTCACGGAGCACCTCTTTCAGA TGAGGAAGCAAGAGAGACAAAGAGGTTCTTTGGTTTTCCTGATGATAAGGAGTTCTATATTCCTCAGGAGGCTTTAGAAC ATTTCAGAAAGGCGATTGAGAGAGGTGAGAAGTGGGAAAGAGAATGGTCTGAGATGTTCAAGGAGTATGAAAAAGCATAC CCTGATCTTGCAGAGGAGTTTAAAAGATTTATATCAGGAGAGCTTCCTGAAGGGTGGGACAGGAATCTCCCGGAATTTAA AGACACATCAAAGAAGATAGCAACAAGATCAGCTTCAGGAGAGACATTAAATGTTCTTGCAGACAGGCTCCCAAATCTTA TAGGTGGATCTGCAGATCTCGCACCATCAAACAAGGTTGTTATGAAAGGAAAGGGTGATTTTTACTGTGAGACACCAACT GGAAGGAATATACATTTTGGTATAAGAGAACATGCAATGGGAACAGCTGTTAACGGTATGGCTCTCCACGGTGGTATTAT ACCGTTTGGCGCCACTTTCTTTGTTTTCACAAACTATATGAGAGCATCTATAAGAATGGCTGCACTGATGGATATACATT CCATATTCATATTCACACATGACAGTATAGGGGTCGGTGAGGATGGCCCTACACACCAGCCAGTTGAACACCTTATGTCA TTCAGAATTATGCCAAATATGACCGTTATAAGGCCTGCAGATGCAAATGAGACCGTTGAGGCGTGGAAGATAGCTTTAGA GAGGAAAAAACCTGTTATGCTTGTTCTAACAAGACAGAACGTTCCTGTTCTTGATCCAAGTAGATATCCGATAAAAGAAG GCGTAAAAAAAGGTGCTTACATACTTGAAGACTGTGAAAATCCAGATCTTATACTTGTAGGAACAGGATCTGAGGTTCAT GTTGTACTGGATGCAAAAAAGATACTTGATCAGAAAGGTGTAAAATCAAGGGTTGTATCAATGCCGTCATGGGAGCTCTT CCTTGAACAGGATGAGAGCTACAGAAAAGAGGTGATACCTGAAAACATACCTAAGGTTGTTGTTGAAGCAGGTGTTGCAC TTGGATGGAAGGATATAGTCGGGGATAACAGTATTATCATAGGTCTTGATAGATTTGGCGAGTCTGCCCCAGGAGATGTT CTTATGAAAGAGTTCGGTTTCACACCTGAAAATGTGGCAGAAAAGGCACTGTCAGTTCTACAGAAAATAGCTTGA Protein sequence : MENIDQLCVNTIRILSLDQIQKAKSGHPGMPLGAAPMAYVLWDRVLKHNPKNPNWFNRDRFILSAGHGSAMLYSLLHLYG YDLPLDELKRFRQLGSKTPGHPEYGLTPGVEATTGPLGQGFGMGVGMAIAECYLSNYFNRDGFNIVDHYTYAIVSDGDLM EGISSEAAALAGRLKLGKLIYLYDDNHITIEGDTNLAWNEDIELRFKAHGWHVITVSDGNDLDAIYGAIKAAQDEKERPS LIKIRTHIGYGSPKQDDPEVHGAPLSDEEARETKRFFGFPDDKEFYIPQEALEHFRKAIERGEKWEREWSEMFKEYEKAY PDLAEEFKRFISGELPEGWDRNLPEFKDTSKKIATRSASGETLNVLADRLPNLIGGSADLAPSNKVVMKGKGDFYCETPT GRNIHFGIREHAMGTAVNGMALHGGIIPFGATFFVFTNYMRASIRMAALMDIHSIFIFTHDSIGVGEDGPTHQPVEHLMS FRIMPNMTVIRPADANETVEAWKIALERKKPVMLVLTRQNVPVLDPSRYPIKEGVKKGAYILEDCENPDLILVGTGSEVH VVLDAKKILDQKGVKSRVVSMPSWELFLEQDESYRKEVIPENIPKVVVEAGVALGWKDIVGDNSIIIGLDRFGESAPGDV LMKEFGFTPENVAEKALSVLQKIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-140 | 51 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-141 | 50 |
