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Name : PERMA_0165 (PERMA_0165) Accession : YP_002729964.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 147140 - 148105 bp Length : 966 bp Strand : - Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGAAGGATAAATCACCTTCACAGATAGGGAAGAAGGTTTTAGAGGAAGAAAGAAACGCTTTACAGAAAACGCTGTCAGC ACTTGATAATAACTTTGATAAGGCTGTTGAGCTTATACTGAACACAAAAGGTAAGGTTGTTGTTACAGGAATGGGGAAGT CCGGTCTTGTTGGGAAAAAGATAGCTGCCACACTTGCATCAACAGGAACACCCTCTTTTTTCCTGCATCCTGCTGAGGCT ATACATGGTGATCTTGGTATGATCTCAAAAGAGGATATCGTTCTGGCCATATCAAACAGCGGTGAGACACCTGAACTTCT GGCTATAATACCAACGATTAAAAGATGGGGAAATAAGGTTATATCAATAACAAACAATAAAAACTCAACCCTGGCAAAGG AGAGTGATATACATCTGTACCTTAATATAGAAAGGGAGGCTTGTCCTCTAAATTTAGCCCCAACATCATCATCCACAGCA ACACTCGCACTTGGAGATGCCCTTGCTGTTGCCCTTTTAGAGATGAGAGGATTTACAGCTGAGGATTTTGCAAGATTCCA TCCTGGAGGATCATTGGGCAGAAAGCTTATGAGAGTCTCAGAAATAATGCATAGAGGTGAAGAGCTTCCCGTTGTTCATC CAGAAACGGAGCTTAAAGAGACTGTTATTGTTATGTCAGAAAAAGGTTTTGGTGCTGCATTGATAATTAACAAAGACGGA GATCTGACAGGCATTATTACAGATGGGGATCTTAGAAGGTTTATAAAGAAAGGGGGAAGTATAGACAGAAGTCTCACTGA AGAAGCTATGACAGTAAATCCAAAGTATATAAACAAAGATATCTTAGTAGTTGAAGCCCTCGAGATAATGGAAAGGTACA ACATTACAGTTCTGCCTGTTGTTGAGGATAAAAAACCTGTGGGACTTGTACACCTTCACGATATATTAAAAAGCGGTGTT ATTTAA Protein sequence : MKDKSPSQIGKKVLEEERNALQKTLSALDNNFDKAVELILNTKGKVVVTGMGKSGLVGKKIAATLASTGTPSFFLHPAEA IHGDLGMISKEDIVLAISNSGETPELLAIIPTIKRWGNKVISITNNKNSTLAKESDIHLYLNIEREACPLNLAPTSSSTA TLALGDALAVALLEMRGFTAEDFARFHPGGSLGRKLMRVSEIMHRGEELPVVHPETELKETVIVMSEKGFGAALIINKDG DLTGIITDGDLRRFIKKGGSIDRSLTEEAMTVNPKYINKDILVVEALEIMERYNITVLPVVEDKKPVGLVHLHDILKSGV I |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-49 | 47 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-49 | 47 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-49 | 47 |
