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Name : PERMA_1054 (PERMA_1054) Accession : YP_002730840.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase (HDH) Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 1011560 - 1012885 bp Length : 1326 bp Strand : + Note : identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447 DNA sequence : TTGAAAAGAATAGATATTGGACTGGTAGGTTACGGCGTTGTAGGTAATGGTGTTGCAAGGATACTTGAAGAGAAAAAGGA ACTGCTCAGTAAAAAAAGTGGTGTTGAGATAAATCTGAAAAAGGTTTTCACAAGAAACTGGAATAAAAGCTTTCCATACC CATTACCTGAGAGTAAAAAAGCTTACTCCCTTGATGAGATCTTACAGGATGATGATATATCAATCGTTGTTGAGCTTACA GGGGGTATTGATTTTCCCTACAAACTAATCTCAGAAGCTGTAGAAAAGGGAAAACATGTTGTTACAGCTAACAAAGCGCT TCTCGCTGAAAGGGGGAAGGAGATATTCCTGAAGGCTGAACAGAAAGATATAAGAATAGGATATGAGGCTGCTGTTGCAG GGGGAATACCTATAATAAGAGCCCTCAGAGAAGGACTGATAGCCAACGATATAATTAAAATCTACGGGATCTTAAACGGG ACTACAAACTACATTCTGACAAGTATGTACAAACAGGGTAAGGATTTTAAAACAGCGTTGAGGGAAGCCCAGGAGCTCGG ATATGCTGAGGCTGATCCAACACTTGATATAAACGGAACAGATGCAGCACATAAGATAACTATACTCGCATCTCTTTCTT ACGGTGGTTTCCTTGATTTTTCTCAGGTTTATGTTGAAGGTATAGAGAGTATACACCCCCTTGATATAGAGCTTGGGAAG GATCTTGGTTATGTCTTAAAACTTCTTGCTATAGCTAAGGGACATAACGGTGAGGTTGAGGTAAGGGTTCATCCTACATT CATACCTGAGGATAACCCACTTGCAAAGGTTGATGGTGTTTTCAATGCTGTTATGGTGGAAGGTGATGCTGTAGGAGAGA GTATGTTTTACGGTAAAGGTGCAGGTAGCCTGCCTACAGCAAGTGCTGTCATAAGTGATATAGTTGATATATCAAAGAGT ATAGCTGAAGGTGTGGGAAGGGGTATTGAGATAACATCAATGAACTGGGAACATAAAGATCTGACACTAACAAGGGTTCC TGACTTTTACACAAGATACTATCTCAGGTTTACAGTCCCTGATGTTACAGGCATACTTGCAAAGGTTGCCGCAGTATTTG CGAGATTCAATATAAGCATAGCTGCTGTTATACAGAAGGAAAAGGTTGTAAGTATGTATGAAAGTAAAGAAAAGGTCGTT CCCCTTGTAATTCTCACACACACAGCCTCTGAAAACAATATACAGAAAGCTATAAAAGAGATAGAACAGCAGGGAATTAC GGTAGAAAAGACGGTCATAATAAGGGTGGAAGACGAAGAAAAGTAA Protein sequence : MKRIDIGLVGYGVVGNGVARILEEKKELLSKKSGVEINLKKVFTRNWNKSFPYPLPESKKAYSLDEILQDDDISIVVELT GGIDFPYKLISEAVEKGKHVVTANKALLAERGKEIFLKAEQKDIRIGYEAAVAGGIPIIRALREGLIANDIIKIYGILNG TTNYILTSMYKQGKDFKTALREAQELGYAEADPTLDINGTDAAHKITILASLSYGGFLDFSQVYVEGIESIHPLDIELGK DLGYVLKLLAIAKGHNGEVEVRVHPTFIPEDNPLAKVDGVFNAVMVEGDAVGESMFYGKGAGSLPTASAVISDIVDISKS IAEGVGRGIEITSMNWEHKDLTLTRVPDFYTRYYLRFTVPDVTGILAKVAAVFARFNISIAAVIQKEKVVSMYESKEKVV PLVILTHTASENNIQKAIKEIEQQGITVEKTVIIRVEDEEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 7e-65 | 44 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 7e-65 | 44 |
