Gene Information

Name : SULAZ_0357 (SULAZ_0357)
Accession : YP_002728351.1
Strain : Sulfurihydrogenibium azorense Az-Fu1
Genome accession: NC_012438
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein CapD
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 322228 - 324108 bp
Length : 1881 bp
Strand : +
Note : identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321

DNA sequence :
ATGAGAAAAATAAAAGATTTTTTAAAAAAAATATTTGAACCTACAAAAGCAAAAAGATTTTTGTTTTTTTTATTTAATGA
TTTACTAATTTTCATGTTTAGCTTTATTTTCTCTTTTTACTTAAGATTTGAGTTTAACATACCAGAAAATTATAAAAGTT
CAATAATTTACTGGGTAATACCTTTAACTTTAGGTAAAGTGTTAATTTTCTATTTTTTAGATATTTATAAATTAAACTGG
AGATTCGTTGGACTTCGTGAACTCTCAAAAATTTTCTTAGGTTTACTTTCCTTTTTTGTAGTTATTTTCTTTTTGAATTA
TCTCCTACAGAAAAATTTTAACTCTTTGTCTATTCCTCAATCTGTTTTAGTTATAGATTTTTTCATATCTCTAATTTTAA
TTGGATCGCTTAGAATCTCAAAAAGGATTTATTTAGAAATTTTTTCTATAAATAAAAGTGGTAAAAGAACACTTATAGTA
GGTGCAGGGTCAACAGGAGAAAGGATTGTAAGAGGTTTAATAAAAGATCCAAATTATAATCCTGTAGGATTTGTAGATGA
CGATCCTAACAAATTAGGTACTACTATTCACGGTGTACCTGTTTTAAACAGCCTAGATAATATTCAAGATGTTATTAAGG
AGAATAGAATAGAGTCTGTTATTTTAGCTATTCCAAGTCTTAATCATAGAGAGATAAAAAGATTATACAATTTTATTAAA
GAGCAAGGAATAAATGATATAAAAATAGTACCAAGTTTAAAAAACCTCCCTAACAACATAGAACTATCAGTAAAAACTTT
AAAGGACATCTCTATAGAAGACTTACTATTTAGAGAGGAAATTAATATAGATAAAGATAAAGTCACAAAATTTTTAAAAG
GAAAGAAAATATTTATCTCAGGAGCTGGTGGATCAATAGGCAGTGAAATAGTAAGACAAGTTATAGATTTCAATCCATGT
ATGATAATAGCCTTTGAGATAGATGAAACGGAACTTTATAATCTAACTTTAGAAGTTTTAGATAAATGCAAAGGATATGG
AATAGAGTTTATTCCAATAGTAGGAGATATAAGAAATAAGGACAAATTAGATAATATTTTCAAAAAGTATGCTCCTAAAA
TAGTTTTTCATGCTGCAGCCTATAAACACGTTCCTCTAATGGAGTATTTTCCTGAAGAAGCTGTAAAAACAAATGTATTT
GGTACTTATAACCTTGCCGATGTATCTGTAAAATATAAAGTTGAAAAGTTTGTTAATATTTCTACTGACAAAGCGGTAAA
TCCAACAAGTATAATGGGAGCTACTAAAAGACTTGCAGAGATAATATGTAATAGTTTTAATCAGGTAAACATAACTAAAT
TTATATCTGTGAGATTTGGAAACGTACTGGGAAGTCGTGGAAGTGTAATACCAATTTTTTTAGAACAAATTAAAAAAGGT
GGTCCAGTAACTGTAACACATCCAGAAATGCAAAGATATTTTATGACTATTCCAGAAGCAGTATTACTTGTATTACAAGC
TGCAGCGATGGGAGAAGGAGGAGAAATTTTTGTTCTTGATATGGGAGAACCTATAAAAATAGTTAAACTTGCAGAAGAAC
TAATTAGATTACAAAACTTAGAGCCTTACAAAGATATAGAAATTGTTTTTTCAGGTTTAAGACCGGGAGAAAAGCTGTTC
GAAGAGTTATTAACAGCAGAAGAAGGTACAGATAAAACCTACCATGAAAAAATATATATAGCGAAAAATCCAAAGTTTAT
GACTTTACAAGATTTAGATTACTACTTAAAAGAATTAGAAAAAATAATAGAATTATGTCCTGAGAATATAAAAGACTTTT
TAAAAAAGATAGTTCCATTTTATACTGATAACAAAGATTGA

Protein sequence :
MRKIKDFLKKIFEPTKAKRFLFFLFNDLLIFMFSFIFSFYLRFEFNIPENYKSSIIYWVIPLTLGKVLIFYFLDIYKLNW
RFVGLRELSKIFLGLLSFFVVIFFLNYLLQKNFNSLSIPQSVLVIDFFISLILIGSLRISKRIYLEIFSINKSGKRTLIV
GAGSTGERIVRGLIKDPNYNPVGFVDDDPNKLGTTIHGVPVLNSLDNIQDVIKENRIESVILAIPSLNHREIKRLYNFIK
EQGINDIKIVPSLKNLPNNIELSVKTLKDISIEDLLFREEINIDKDKVTKFLKGKKIFISGAGGSIGSEIVRQVIDFNPC
MIIAFEIDETELYNLTLEVLDKCKGYGIEFIPIVGDIRNKDKLDNIFKKYAPKIVFHAAAYKHVPLMEYFPEEAVKTNVF
GTYNLADVSVKYKVEKFVNISTDKAVNPTSIMGATKRLAEIICNSFNQVNITKFISVRFGNVLGSRGSVIPIFLEQIKKG
GPVTVTHPEMQRYFMTIPEAVLLVLQAAAMGEGGEIFVLDMGEPIKIVKLAEELIRLQNLEPYKDIEIVFSGLRPGEKLF
EELLTAEEGTDKTYHEKIYIAKNPKFMTLQDLDYYLKELEKIIELCPENIKDFLKKIVPFYTDNKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-77 48
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 7e-78 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SULAZ_0357 YP_002728351.1 polysaccharide biosynthesis protein CapD VFG1300 Protein 1e-75 46