|
Name : SULAZ_0339 (SULAZ_0339) Accession : YP_002728333.1 Strain : Sulfurihydrogenibium azorense Az-Fu1 Genome accession: NC_012438 Putative virulence/resistance : Virulence Product : VI polysaccharide biosynthesis protein VipA/tviB Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : 1.1.1.- Position : 306074 - 307393 bp Length : 1320 bp Strand : + Note : identified by match to protein family HMM PF00984; match to protein family HMM PF02558; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 DNA sequence : ATGGATGTAAACCAATTTAAAAAAGGGAATCCAGAAAAAATAGCCATTATAGGTCTTGGATACGTAGGATTACCACTAGC AGTCTTATTCGACACAAAGTATAATGTAATCGGGTACGATATAAACCCACAAAGAATAAAAGAGCTGAAAGAGGGATACG ATAGAACAAAAGAAGTAGAACCTGAAAAACTAAAAAATTGTCAAATAGATTTTACAGACAACCCAGAAAAAATATCCCAA GCAAAAGTAATAATCGTTACAGTCCCAACCCCTATAGACGAGTACAACATTCCAGACTTAAGACCAATACTCTCAGCTTC TAAGACAGTTGGAAGATATATGAAAAAAGGTAGTATAGTTGTATACGAATCAACTGTGTATCCCGGACTAACGGAAGAAG AGTGTGTACCGATATTAGAAAAAGAAAGTGGCTTAAAGTGGAAAGAAGACTTTAATGTAGGATACTCTCCTGAAAGAGTG AACCCCGGAGATAAACAGCACACAATAGATAAAATAAAAAAAGTAGTAGCCGGAGACACACCTGAAATAACAGAATTTTT AGCTAAGCTCTATGGAGAAGTAATAACAGCAGGAATACACAAAGCACCAGACATAAAAACAGCAGAAGCTGCAAAAGTAA TAGAAAACACTCAAAGAGATTTAAACATAGCACTAATGAACGAACTATCAATAATATTTAACAAAATGGGAATAGATACA AAAGAGGTTTTAGAAGCTGCATCAACCAAGTGGAACTTTTTAAGGTTTGAACCGGGGTTGGTTGGCGGCCATTGTATTGG CATTGACCCGTACTACCTAACCTTCAAAGCCCAAGCAATAGGCTACCATCCGGAAGTAATACTAGCCGGAAGAAGAATAA ACGACTACATGGGTAAGTACGTAGCAGAAAATACAGTTAAGAAATTAATAAAAGCCGGAAAACCGGTAAAAGGAAATAAA GTACTAATACTAGGACTGACCTTTAAAGAAAACATATCAGACATAAGAAACACGAAAGTTATAGATGTTTACAACGAACT AAAAGAGTACGGTGTAGATGTCTATATCTACGACCCCTACGCATACCCGGATGAAGTAAAACACGAGTACGGTATAGAAC TGTTAGACAACATAGAAAAACACACACCATACGACGCTGTAATAGTAGCAGTAAAACACAAACCATTTATTGAAGAATTA GACTTTAAACAGTACAAAAAACTAATGAATAACGGCGGAGCTCCAATCTTAATAGATGTAAAAGGAATGTACAACAAAGA AAAAGCACTAAAAGAAGGCTTTTTATACTGGAGGTTATAA Protein sequence : MDVNQFKKGNPEKIAIIGLGYVGLPLAVLFDTKYNVIGYDINPQRIKELKEGYDRTKEVEPEKLKNCQIDFTDNPEKISQ AKVIIVTVPTPIDEYNIPDLRPILSASKTVGRYMKKGSIVVYESTVYPGLTEEECVPILEKESGLKWKEDFNVGYSPERV NPGDKQHTIDKIKKVVAGDTPEITEFLAKLYGEVITAGIHKAPDIKTAEAAKVIENTQRDLNIALMNELSIIFNKMGIDT KEVLEAASTKWNFLRFEPGLVGGHCIGIDPYYLTFKAQAIGYHPEVILAGRRINDYMGKYVAENTVKKLIKAGKPVKGNK VLILGLTFKENISDIRNTKVIDVYNELKEYGVDVYIYDPYAYPDEVKHEYGIELLDNIEKHTPYDAVIVAVKHKPFIEEL DFKQYKKLMNNGGAPILIDVKGMYNKEKALKEGFLYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-113 | 60 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-102 | 59 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-102 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SULAZ_0339 | YP_002728333.1 | VI polysaccharide biosynthesis protein VipA/tviB | VFG0431 | Protein | 5e-103 | 59 |
