Gene Information

Name : SULAZ_0260 (SULAZ_0260)
Accession : YP_002728255.1
Strain : Sulfurihydrogenibium azorense Az-Fu1
Genome accession: NC_012438
Putative virulence/resistance : Virulence
Product : sugar isomerase, KpsF/GutQ family
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 232329 - 233285 bp
Length : 957 bp
Strand : +
Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393

DNA sequence :
ATGGATGTGCAAATCATTGATTTAGGTAAGCAAACAATAGAAGAAGAAATAAGGGCTTTAAATAGATTAAAAGAATGTCT
TGATGAGAGTTTTGAGAAAGCTGTAAAACTTATATTAGAGGCTCAAGGGAAAGTAATAATAACAGGGATGGGAAAGTCTG
GACTTATAGGTAAAAAGATTGCAGCAACGATGTCATCTACGGGAACACCTGCCTTTTTCCTCCATCCGGCAGAAGCTCTC
CACGGAGACCTTGGCATGGTTGAAAAGAAAGACTTGATAATAGCTATATCAAACAGTGGAGAAACTCCTGAGCTTTTAGC
CATCATCCCAATCCTCAAAAGATGGGGAAATAAAATCATTGCTATAACAAACAAAAGAGATTCATCTTTAACAAAGTACG
CTGATGTGTCTTTATACCTGAATGTAGATAAAGAAGCCTGTCCTTTAAACCTTGCTCCTACCTCATCTTCTACAGCTACA
CTTGTTTTAGGAGATGCTCTGGCTGTTGCTTTGCTAAGACTTAGAAACTTTACACCAGAAAACTTTGCAATGTTCCATCC
CGGTGGGTCTTTGGGTAAAAAGCTTATGAAAGTAGCTGATATAATGAGGAAAGACCTGCCAATAGTTTGTGAAGATACAC
CTTTGAAAGAAGCTGTAATAGTTATGTCTGAAAAGGGTCTTGGCTCTACACTTGTGTTAGATAAAGACAACAACCTTACA
GGTATAATAACAGACGGTGATTTAAGAAGATTTATAAACAAGGGAAAAAGTATAGATAACTCTCTTTCGAAAGATGCTAT
GACAAAAAATCCAAAAACAGCTTCTCCTGATTGGTTAGTTTTACAAGCCCTTGAACTTATGGAAAGGCATAATATAACAG
TTTTACCAGTAGTAGAAGACAAAAAACCGGTTGGAATAATCCATATTCACGATATACTAAAAAGTGGGGTTATTTAA

Protein sequence :
MDVQIIDLGKQTIEEEIRALNRLKECLDESFEKAVKLILEAQGKVIITGMGKSGLIGKKIAATMSSTGTPAFFLHPAEAL
HGDLGMVEKKDLIIAISNSGETPELLAIIPILKRWGNKIIAITNKRDSSLTKYADVSLYLNVDKEACPLNLAPTSSSTAT
LVLGDALAVALLRLRNFTPENFAMFHPGGSLGKKLMKVADIMRKDLPIVCEDTPLKEAVIVMSEKGLGSTLVLDKDNNLT
GIITDGDLRRFINKGKSIDNSLSKDAMTKNPKTASPDWLVLQALELMERHNITVLPVVEDKKPVGIIHIHDILKSGVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-58 47
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-58 47
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 3e-58 46