Gene Information

Name : fliP (SULAZ_1354)
Accession : YP_002729321.1
Strain : Sulfurihydrogenibium azorense Az-Fu1
Genome accession: NC_012438
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1260647 - 1261366 bp
Length : 720 bp
Strand : +
Note : identified by match to protein family HMM PF00813; match to protein family HMM TIGR01103

DNA sequence :
ATGGGTAAAGCTTTATTTATTTTACTTTCTTTATTTGTATTCTTTGATTTTAGCCAAGCTGATTTACTCACAGAGACTTT
GCAAAATTTTAATAGGTTAGATACTTCTTTAAAAATTCTCCTTCTTATAACAGTACTTAGTATAGCTCCTGCTATTCTTA
TAAGTATGACATCCTTTGTGAGGATAGTTATAGTCCTATCTTTACTAAGGCACGCCCTTGGTATTCCTACAGCTCCTCCA
AATCAAGTTATTGTAGGTCTTGCATTATTTTTAACTTTTTTTATAATGAAACCTGTTTTTGATAAGATAAACGAAGTAAG
CCTTACACCTTACCTTAAAAAACAAATTTCAGATGTTCAAGCTATAGAAAATGCAAAACAACCTCTAAAAGAGTTTATGC
TAAAAAATACAAGGAAAGAAGATTTAAAACTTTTTATAGATATATCAAAAGAAAAACCACAAAAACTGGAAGATGTAAGT
ATGACTACACTTATTCCTGCATTTATGATAAGTGAGATAAAAACAGCTTTTGAGATAGTTTTTATCATATACTTGCCGTT
TATAGTTATAGACTTTGTAGTTGCAAGTATCCTTATGTCTATGGGTATGATGATGGTGCCACCAATGTTTATCTCACTTC
CTTTTAAGCTTATGCTTTTTGTTCTTGCTGATGGTTGGGAACTGTTAACAAAGGCTTTAATACAAAGTTATAAATTTTAA

Protein sequence :
MGKALFILLSLFVFFDFSQADLLTETLQNFNRLDTSLKILLLITVLSIAPAILISMTSFVRIVIVLSLLRHALGIPTAPP
NQVIVGLALFLTFFIMKPVFDKINEVSLTPYLKKQISDVQAIENAKQPLKEFMLKNTRKEDLKLFIDISKEKPQKLEDVS
MTTLIPAFMISEIKTAFEIVFIIYLPFIVIDFVVASILMSMGMMMVPPMFISLPFKLMLFVLADGWELLTKALIQSYKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-26 42
lscR AAO18040.1 LscR Virulence TTSS locus Protein 9e-27 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 9e-24 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 9e-24 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_002729321.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-46 56
fliP YP_002729321.1 flagellar biosynthetic protein FliP VFG2494 Protein 3e-47 56
fliP YP_002729321.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-48 54
fliP YP_002729321.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-51 50
fliP YP_002729321.1 flagellar biosynthetic protein FliP VFG0394 Protein 7e-28 46
fliP YP_002729321.1 flagellar biosynthetic protein FliP VFG0188 Protein 4e-28 41