Gene Information

Name : thiC (SULAZ_1262)
Accession : YP_002729231.1
Strain : Sulfurihydrogenibium azorense Az-Fu1
Genome accession: NC_012438
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1176972 - 1178330 bp
Length : 1359 bp
Strand : +
Note : identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190

DNA sequence :
ATGAGGTTCTATGTATCAAAACGTAGAGGTCAAAAAAATGTTACACAGATGCACTATGCACGTCAGGGAATAATCACAGA
AGAGATGGAGTACGTTGCGAAAAGGGAAGACCTTCCCGTTGAGCTTGTTAGGGAAGAGGTTGCAAGGGGAAGGATGGTTA
TACCCGCTAACATCAATCACATAAACCTTGAACCTATGGCAATAGGTATCGCTGCAAAGTGTAAAGTAAACGCAAACATT
GGAAACTCTGCCATCACTTCAGACATAGAGACAGAGCTTGAAAAGTTAAGAGTAGCTCTAAAGTATGGTGCAGACACAGT
TATGGACTTATCAACTGGTGGTAATCTAAACGAGATAAGAAAGGCCATAATAGAAAACTCTCCTGTCCCTGTTGGAACAG
TTCCAATATATCAAGCACTTCAAGAAGTAAGAAGTATAGAGAAACTTACAGAGCAAGATATCCTTGATATTATAGAACTT
CAAGCTCAACAAGGTGTTGATTATATGACTATCCACGCTGGACTGTTAAGAGAATTTTTACCTCTTGTAAATCATAGACT
TATGGGTATAGTATCAAGGGGTGGGTCAATTATAGCTCAGTGGATGATAGTCCATGGAAAACAGAATCCTCTTTACACAA
ACTTTGATAAGATTTGTGAGATATTTAAAAAGTACGACGTTACATTCTCTCTTGGTGATGGATTAAGACCAGGTTGCATA
AACGATGCATCAGATGAAGCACAGTTTGCAGAGTTAAAGGTTTTAGGAGAACTTACTAAGAAGGCATGGGAGCATGATGT
TCAAGTTATGGTAGAAGGCCCGGGACACGTTCCTATGGATCAGATAGAGATGAACATTAAAAAACAGATGGAATTATGCC
ATGAAGCTCCATTCTACGTACTTGGACCGTTAGTAACAGATATAGCTCCCGGTTATGACCATATAGCTTCAGCTATTGGA
GCAGCAATGGCAGGATGGTACGGAGCTGCAATGCTATGTTATGTAACACCAAAAGAACACTTAGGTTTACCAAATCCTGA
AGATGTAAAACAAGGATTAATTGCATACAAGATAGCAGCTCACGCAGCAGACCTTGCGAGACACAGAAAAGGTGCTAAAG
AGTGGGACGATGAAATGTCAAGGGCAAGGTACAACTTTGACTGGGAAAGACAGTTTGAGCTTGCAATAGACCCGGAAACA
GCAAGAAAATACCACGACGAAACACTACCTCAAGAAGGATTTAAATCTGCTAAGTTCTGCTCTATGTGTGGACCATCTTT
CTGTGCTTACAAGATATCCCAAAACGTTCAAGAAGCTGTAAAAGAAAACGAAGTAGAATTCCTTCCTATAATAAAATAA

Protein sequence :
MRFYVSKRRGQKNVTQMHYARQGIITEEMEYVAKREDLPVELVREEVARGRMVIPANINHINLEPMAIGIAAKCKVNANI
GNSAITSDIETELEKLRVALKYGADTVMDLSTGGNLNEIRKAIIENSPVPVGTVPIYQALQEVRSIEKLTEQDILDIIEL
QAQQGVDYMTIHAGLLREFLPLVNHRLMGIVSRGGSIIAQWMIVHGKQNPLYTNFDKICEIFKKYDVTFSLGDGLRPGCI
NDASDEAQFAELKVLGELTKKAWEHDVQVMVEGPGHVPMDQIEMNIKKQMELCHEAPFYVLGPLVTDIAPGYDHIASAIG
AAMAGWYGAAMLCYVTPKEHLGLPNPEDVKQGLIAYKIAAHAADLARHRKGAKEWDDEMSRARYNFDWERQFELAIDPET
ARKYHDETLPQEGFKSAKFCSMCGPSFCAYKISQNVQEAVKENEVEFLPIIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 3e-126 63
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 3e-126 63
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 1e-120 58